Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G29800.1 | Thale cress | cytosol | 68.72 | 85.29 |
| CDY26313 | Canola | cytosol | 83.89 | 84.02 |
| GSMUA_Achr5P06610_001 | Banana | cytosol | 50.71 | 66.74 |
| VIT_10s0003g01800.t01 | Wine grape | cytosol | 53.87 | 64.95 |
| KRH21202 | Soybean | cytosol | 54.19 | 63.52 |
| KRH11072 | Soybean | cytosol | 53.24 | 62.41 |
| GSMUA_Achr7P13820_001 | Banana | cytosol | 51.03 | 61.64 |
| Zm00001d053541_P002 | Maize | cytosol | 45.5 | 55.28 |
| EES04807 | Sorghum | cytosol | 45.97 | 54.7 |
| Zm00001d016234_P001 | Maize | cytosol | 45.02 | 53.47 |
| TraesCS7D01G367900.1 | Wheat | cytosol | 44.23 | 52.93 |
| TraesCS7B01G272800.1 | Wheat | cytosol | 43.92 | 52.75 |
| TraesCS7A01G354900.1 | Wheat | cytosol | 43.76 | 52.36 |
| Os02t0233100-01 | Rice | cytosol | 44.23 | 52.34 |
| EER89914 | Sorghum | cytosol | 42.97 | 50.94 |
| Os06t0552400-02 | Rice | cytosol | 44.08 | 50.82 |
| Solyc02g071980.2.1 | Tomato | cytosol | 54.19 | 49.71 |
| PGSC0003DMT400073054 | Potato | cytosol | 53.71 | 49.28 |
| HORVU7Hr1G088960.1 | Barley | endoplasmic reticulum | 44.87 | 46.79 |
| Zm00001d046304_P001 | Maize | cytosol, plastid | 42.81 | 38.99 |
| CDY30955 | Canola | cytosol | 31.28 | 34.68 |
| CDY44837 | Canola | cytosol | 32.39 | 34.28 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | GO:A0A078EFE9 | EnsemblPlants:CDX99856 | ProteinID:CDX99856 | ProteinID:CDX99856.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00108576001 | InterPro:IPR013083 | InterPro:IPR017455 |
| PFAM:PF01363 | PFAM:PF04366 | PFscan:PS50178 | PANTHER:PTHR15629 | PANTHER:PTHR15629:SF9 | SMART:SM00064 |
| SUPFAM:SSF57903 | UniParc:UPI0004EF3D2E | InterPro:Ysc84_actin-binding | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
BnaC05g22780D
Coordinates
chrLK031914:+:610673..613696
Molecular Weight (calculated)
69717.0 Da
IEP (calculated)
5.442
GRAVY (calculated)
-0.411
Length
633 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKVLTCNRF PLDKVASQSK SREGRKEGSN LKKMDKGVRD SHGDSDAGNV VSQTIREDRE EDSTLREGFA NESKIHEPDH QNMKLQMDDS VRDSDAGNVA
101: SQSIRETIQE HYTLREEDSK ILESDHQNLK LGMDVNVGDS DAGSVVSQTI RDTRQEDSTL RKDESNKLEP DQQKRGKYFF YDTPLSEETG VWIPVSVPPM
201: LEPDHEEWSR GLSFNGGYFP EGEMGWNQIL DEDKELTMWD VIVDMLLAAR GKATALASGN LESGISFFAG QHLLEQAWQE MAHTLTEANF GNAREILETE
301: PPKWLPDSAA SACMLCSVRF HPIMCSRHHC RYCGGLFCRD CSKGRSLLPV KFRVSDPQRV CDVCCVRLET VQPYLMDQVS PAAQLPTHDL TDLSTLRSWV
401: NFPWGQSMEY EIYKATNTIR GYISKVGSSR TERSIPDAIL RQAKGLAVIT VARVGVMVTY RIGTGLVVAR RDDGSWSPPS AISSFGLGWG AQAGGEFIDF
501: IIVLRTREAI RTFGSNTHFV VGAGLSAAVG VTGRAVEADI RAGSGGYAAC YTYSCSKAGA FVGCSLEGSI FTTRTSENSR FYGSQSLAAS DILLGSLPKP
601: PAAAPLYRAL GDLFQKMGSE TIRSSTTSSF SED
101: SQSIRETIQE HYTLREEDSK ILESDHQNLK LGMDVNVGDS DAGSVVSQTI RDTRQEDSTL RKDESNKLEP DQQKRGKYFF YDTPLSEETG VWIPVSVPPM
201: LEPDHEEWSR GLSFNGGYFP EGEMGWNQIL DEDKELTMWD VIVDMLLAAR GKATALASGN LESGISFFAG QHLLEQAWQE MAHTLTEANF GNAREILETE
301: PPKWLPDSAA SACMLCSVRF HPIMCSRHHC RYCGGLFCRD CSKGRSLLPV KFRVSDPQRV CDVCCVRLET VQPYLMDQVS PAAQLPTHDL TDLSTLRSWV
401: NFPWGQSMEY EIYKATNTIR GYISKVGSSR TERSIPDAIL RQAKGLAVIT VARVGVMVTY RIGTGLVVAR RDDGSWSPPS AISSFGLGWG AQAGGEFIDF
501: IIVLRTREAI RTFGSNTHFV VGAGLSAAVG VTGRAVEADI RAGSGGYAAC YTYSCSKAGA FVGCSLEGSI FTTRTSENSR FYGSQSLAAS DILLGSLPKP
601: PAAAPLYRAL GDLFQKMGSE TIRSSTTSSF SED
001: MDERDREIRA SHGDSNAGNV VSQSIENTRE EDSGSCEGFV EESKRLEPEQ QKHGKYFFYD TPLSEETGVW IPVSVPPMLE PDHEEWSRGL SFNGGYFPEG
101: DMGWDQIFDE DKELTMWDVI VDMLLAARGK ASALSSGNLE RCGINFLSGH LLEQAWQDMA HTLTEANFGN AREILETEPP KWLPDSAASA CMLCSVRFHP
201: IMCSRHHCRY CGGIFCRDCS KGKSLVPVKF RVSDPQRVCD VCFVRLESVQ PYLMDQVSPA AQLPTHDLTD LSTLRSWVNF PWGQSMEYEI YKATNTLRGY
301: ITKVGSSRTE RSIPDAILRQ AKGLAVITVA RVGVMVTYKI GTGLVVARRD DGSWSPPSAI SSFGLGWGAQ AGGEFIDFII VLRTREAIQT FGSNTHLVVG
401: AGLSAAVGVT GRAVEADIRA GSGGYAACYT YSCSKGAFVG CSLEGSIFTT RTSENSRFYG SQSLAASDIL LGSLPRPPAA AALYRALGDL YQKMGSETVR
501: SPAISPLSED
101: DMGWDQIFDE DKELTMWDVI VDMLLAARGK ASALSSGNLE RCGINFLSGH LLEQAWQDMA HTLTEANFGN AREILETEPP KWLPDSAASA CMLCSVRFHP
201: IMCSRHHCRY CGGIFCRDCS KGKSLVPVKF RVSDPQRVCD VCFVRLESVQ PYLMDQVSPA AQLPTHDLTD LSTLRSWVNF PWGQSMEYEI YKATNTLRGY
301: ITKVGSSRTE RSIPDAILRQ AKGLAVITVA RVGVMVTYKI GTGLVVARRD DGSWSPPSAI SSFGLGWGAQ AGGEFIDFII VLRTREAIQT FGSNTHLVVG
401: AGLSAAVGVT GRAVEADIRA GSGGYAACYT YSCSKGAFVG CSLEGSIFTT RTSENSRFYG SQSLAASDIL LGSLPRPPAA AALYRALGDL YQKMGSETVR
501: SPAISPLSED
Arabidopsis Description
RING/FYVE/PHD-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q84WW7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.