Factsheet for GSMUA_Achr5P06610_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P13820_001	Banana	cytosol	76.51	70.23
GSMUA_Achr1P21800_001	Banana	extracellular, golgi, plastid	14.14	68.69
AT1G29800.1	Thale cress	cytosol	66.74	62.94
VIT_19s0014g00860.t01	Wine grape	cytosol	67.98	62.64
VIT_10s0003g01800.t01	Wine grape	cytosol	65.28	59.81
KRH21202	Soybean	cytosol	65.49	58.33
EES04807	Sorghum	cytosol	64.24	58.08
Zm00001d053541_P002	Maize	cytosol	62.37	57.58
KRH11072	Soybean	cytosol	64.24	57.22
Zm00001d016234_P001	Maize	cytosol	62.79	56.66
TraesCS7D01G367900.1	Wheat	cytosol	61.33	55.77
TraesCS7B01G272800.1	Wheat	cytosol	60.91	55.6
Os02t0233100-01	Rice	cytosol	61.75	55.51
GSMUA_AchrUn_...	Banana	cytosol, extracellular	8.73	55.26
EER89914	Sorghum	cytosol	61.12	55.06
TraesCS7A01G354900.1	Wheat	cytosol	60.5	55.01
GSMUA_AchrUn_...	Banana	extracellular	8.32	53.33
Bra032337.1-P	Field mustard	cytosol	66.53	53.24
Os06t0552400-02	Rice	cytosol	60.71	53.19
CDX99856	Canola	cytosol	66.74	50.71
CDY26313	Canola	cytosol	66.53	50.63
HORVU7Hr1G088960.1	Barley	endoplasmic reticulum	61.33	48.6
GSMUA_Achr3P10170_001	Banana	mitochondrion	41.37	47.16
Solyc02g071980.2.1	Tomato	cytosol	67.36	46.96
PGSC0003DMT400073054	Potato	cytosol	66.74	46.52
GSMUA_Achr8P30460_001	Banana	cytosol	43.24	44.16
Zm00001d046304_P001	Maize	cytosol, plastid	60.71	42.01

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr5G06610_001
EnsemblPlants:GSMUA_Achr5P06610_001	EnsemblPlants:GSMUA_Achr5T06610_001	InterPro:IPR013083	InterPro:IPR017455	UniProt:M0SW90	PFAM:PF01363
PFAM:PF04366	PFscan:PS50178	PANTHER:PTHR15629	PANTHER:PTHR15629:SF9	SMART:SM00064	SUPFAM:SSF57903
UniParc:UPI000296562A	InterPro:Ysc84_actin-binding	InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

FYVE zinc finger domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G06610_001]

Coordinates

chr5:-:4857077..4860640

Molecular Weight (calculated)

52547.8 Da

IEP (calculated)

7.129

GRAVY (calculated)

-0.083

Length

481 amino acids

Sequence
(BLAST)

001: MEDSYSTSSS SKNGNCCSSE LIQASNPGIV CPQISAKRKS RKYFYYDSPL YEETGIWIPV SVPPMSESDH DEWSRGFGCN GGYFPEGEFS WDQSLGVDKE
101: MTMWDVVSEM LLVVRHKLSG LASSDLKSCG MSWISIELLE ETWKEMANSL AETNYGHSME ILETDPPKWL PDSAAASCML CNVRFHPFMC FRHHCRFCGG
201: IFCGDCSTGR SLMPPKFRIA DPQRVCDVCY VRLKSVQHYL MDQVSNASQL LTQDLTDLST LRSWLNFPWG RTMEYEIYKA ANIVRSYSKV GSLRPEKSIP
301: DAILKQAHGL AILTVVNVGL MVTYKVGTGL VVARREDGSW SPPSAISSFG LGWGAQAGGE LTDFIIVLRN KAAIRTFSGN AHLSVGAGLS AAAGIVGRAA
401: EADIRGGDGG YAACYTYSCS KGAFVGCALN GNIVIARTSE NSRFYGAPLK ASDILLGSLP RPPAAAVLYN ALSDLFLKLK R

Best Arabidopsis Sequence Match ( AT1G29800.2 )
(BLAST)

001: MDERDREIRA SHGDSNAGNV VSQSIENTRE EDSGSCEGFV EESKRLEPEQ QKHGKYFFYD TPLSEETGVW IPVSVPPMLE PDHEEWSRGL SFNGGYFPEG
101: DMGWDQIFDE DKELTMWDVI VDMLLAARGK ASALSSGNLE RCGINFLSGH LLEQAWQDMA HTLTEANFGN AREILETEPP KWLPDSAASA CMLCSVRFHP
201: IMCSRHHCRY CGGIFCRDCS KGKSLVPVKF RVSDPQRVCD VCFVRLESVQ PYLMDQVSPA AQLPTHDLTD LSTLRSWVNF PWGQSMEYEI YKATNTLRGY
301: ITKVGSSRTE RSIPDAILRQ AKGLAVITVA RVGVMVTYKI GTGLVVARRD DGSWSPPSAI SSFGLGWGAQ AGGEFIDFII VLRTREAIQT FGSNTHLVVG
401: AGLSAAVGVT GRAVEADIRA GSGGYAACYT YSCSKGAFVG CSLEGSIFTT RTSENSRFYG SQSLAASDIL LGSLPRPPAA AALYRALGDL YQKMGR

Arabidopsis Description

RING/FYVE/PHD-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q84WW7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.