Factsheet for Zm00001d053541_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016234_P001	Maize	cytosol	83.88	81.99
EES04807	Sorghum	cytosol	83.49	81.77
Os02t0233100-01	Rice	cytosol	70.25	68.41
GSMUA_Achr5P06610_001	Banana	cytosol	57.58	62.37
GSMUA_Achr7P13820_001	Banana	cytosol	55.85	55.53
AT1G29800.1	Thale cress	cytosol	53.93	55.1
VIT_19s0014g00860.t01	Wine grape	cytosol	53.93	53.83
VIT_10s0003g01800.t01	Wine grape	cytosol	54.13	53.71
KRH21202	Soybean	cytosol	55.09	53.15
KRH11072	Soybean	cytosol	53.74	51.85
Zm00001d046304_P001	Maize	cytosol, plastid	63.53	47.63
Bra032337.1-P	Field mustard	cytosol	54.89	47.59
CDX99856	Canola	cytosol	55.28	45.5
CDY26313	Canola	cytosol	54.89	45.25
Zm00001d022148_P001	Maize	cytosol	37.24	41.99
Solyc02g071980.2.1	Tomato	cytosol	54.89	41.45
PGSC0003DMT400073054	Potato	cytosol	54.89	41.45
Zm00001d019348_P001	Maize	cytosol	37.62	39.52

Protein Annotations

EntrezGene:100282787	Gene3D:3.30.40.10	MapMan:35.2	ProteinID:AQK59595.1	ProteinID:AQK59596.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0046872	InterPro:IPR013083	InterPro:IPR017455	UniProt:K7UEA9	PFAM:PF01363
PFAM:PF04366	PFscan:PS50178	PANTHER:PTHR15629	PANTHER:PTHR15629:SF13	SMART:SM00064	SUPFAM:SSF57903
UniParc:UPI0002212F37	InterPro:Ysc84_actin-binding	EnsemblPlantsGene:Zm00001d053541	EnsemblPlants:Zm00001d053541_P002	EnsemblPlants:Zm00001d053541_T002	InterPro:Znf_FYVE
InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

Putative FYVE zinc finger containing actin-binding-domain protein family

Coordinates

chr4:+:233438443..233443072

Molecular Weight (calculated)

56276.5 Da

IEP (calculated)

5.347

GRAVY (calculated)

-0.258

Length

521 amino acids

Sequence
(BLAST)

001: MDPPRPAAGR SGGVGTGDSP VSWDDDDDDC SGGGGRVEGL AGLHIFDQEA DEPPAKNSMA NRLDTNCIPV ANGCNTGTSV EKEPVNGIDP PHEHTGIWVP
101: VSVPPMTAQD REEWHRGFSC NGRNFPEEEF SWELDEENNE MTMWDVFADM VVAAKDKVVS SATYDFGRYG MSVVSNFFLQ EAWNDMAQTL ADANTGIVNE
201: LLDTEPTKWL PDSAATSCML CGVRFHPIMC SRHHCRFCGG VFCNGCSKGR SLMPPKFRTA EPQRVCDVCG VRLESIQPQL MNQISRATQL PTRDVTDLST
301: LRSWLNFPWA HTMEYEIYKA TNSLRNYYKV GRLKPEKAIP DTILRQAKGL AIVTVVKVGM MVTYKLGTGL VIARRVDDSW SPPSAISTCG IGYGAQAGGE
401: IADFIIVLRN TDAIRTFSGK AHLSVGAGVS ASAGHVGRAA EADFRAGDGG YAACYTYSCS KGAFVGCALN GSIVSTRDTE NARFYGGPVK ASDILLGSMA
501: KPPAASPLYK ALSELFDKIG K

Best Arabidopsis Sequence Match ( AT1G29800.2 )
(BLAST)

001: MDERDREIRA SHGDSNAGNV VSQSIENTRE EDSGSCEGFV EESKRLEPEQ QKHGKYFFYD TPLSEETGVW IPVSVPPMLE PDHEEWSRGL SFNGGYFPEG
101: DMGWDQIFDE DKELTMWDVI VDMLLAARGK ASALSSGNLE RCGINFLSGH LLEQAWQDMA HTLTEANFGN AREILETEPP KWLPDSAASA CMLCSVRFHP
201: IMCSRHHCRY CGGIFCRDCS KGKSLVPVKF RVSDPQRVCD VCFVRLESVQ PYLMDQVSPA AQLPTHDLTD LSTLRSWVNF PWGQSMEYEI YKATNTLRGY
301: ITKVGSSRTE RSIPDAILRQ AKGLAVITVA RVGVMVTYKI GTGLVVARRD DGSWSPPSAI SSFGLGWGAQ AGGEFIDFII VLRTREAIQT FGSNTHLVVG
401: AGLSAAVGVT GRAVEADIRA GSGGYAACYT YSCSKGAFVG CSLEGSIFTT RTSENSRFYG SQSLAASDIL LGSLPRPPAA AALYRALGDL YQKMGR

Arabidopsis Description

RING/FYVE/PHD-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q84WW7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.