Factsheet for Bra032337.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26313	Canola	cytosol	100.0	95.09
AT1G29800.1	Thale cress	cytosol	72.05	84.9
GSMUA_Achr5P06610_001	Banana	cytosol	53.24	66.53
VIT_10s0003g01800.t01	Wine grape	cytosol	56.24	64.38
KRH21202	Soybean	cytosol	56.24	62.59
GSMUA_Achr7P13820_001	Banana	cytosol	53.74	61.64
KRH11072	Soybean	cytosol	55.07	61.3
Zm00001d053541_P002	Maize	cytosol	47.59	54.89
EES04807	Sorghum	cytosol	47.92	54.14
Zm00001d016234_P001	Maize	cytosol	47.25	53.28
TraesCS7D01G367900.1	Wheat	cytosol	46.26	52.55
TraesCS7B01G272800.1	Wheat	cytosol	45.92	52.37
TraesCS7A01G354900.1	Wheat	cytosol	45.76	51.98
Os02t0233100-01	Rice	cytosol	45.59	51.22
EER89914	Sorghum	cytosol	45.09	50.75
Os06t0552400-02	Rice	cytosol	45.76	50.09
Solyc02g071980.2.1	Tomato	cytosol	55.74	48.55
PGSC0003DMT400073054	Potato	cytosol	55.07	47.97
HORVU7Hr1G088960.1	Barley	endoplasmic reticulum	46.42	45.96
Zm00001d046304_P001	Maize	cytosol, plastid	45.09	38.99
Bra019445.1-P	Field mustard	cytosol	33.28	31.25

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.2	EnsemblPlantsGene:Bra032337	EnsemblPlants:Bra032337.1	EnsemblPlants:Bra032337.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0046872	InterPro:IPR013083	InterPro:IPR017455	UniProt:M4EU55	PFAM:PF01363
PFAM:PF04366	PFscan:PS50178	PANTHER:PTHR15629	PANTHER:PTHR15629:SF9	SMART:SM00064	SUPFAM:SSF57903
UniParc:UPI0002542638	InterPro:Ysc84_actin-binding	InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

AT1G29800 (E=3e-254) | phosphoinositide binding / zinc ion binding

Coordinates

chrA09:-:22439404..22442044

Molecular Weight (calculated)

66330.8 Da

IEP (calculated)

4.963

GRAVY (calculated)

-0.404

Length

601 amino acids

Sequence
(BLAST)

001: MDKGVHGDAD AGNVVRQRIR ETKEEEDSTL DEGFVDESKR LEPDHQNMKL QMDDSVRDHH GDSDAGNVVS QSIRETIQEH YTLREDDSKR LESDYQNLKL
101: GMDVNLGDSN AGNVASQTIR EARQEDSTLR KDESNKLEPD QQKRGKYFFY DTPLSEETGV WIPVSVPPML EPDHEEWSRG LSFNGGYFPE GEMGWNQILD
201: EDKELTMWDV IVDMLLAARG KATALTSGNL ESGISFFAGQ HLLEQAWQEM AHTLTEANFG NAREILETEP PKWLPDSAAS ACMLCSVRFH PIMCSRHHCR
301: YCGGLFCRDC SRGRSLLPVK FRVSDPQRVC DVCFVRLETV QPYLMDQVSP AAQLPTHDLT DLSTLRSWVN FPWGQSMEYE IYKATNTIRG YISKVGSSRT
401: ERSIPDAILR QAKGLAVITV ARVGVMVTYR IGTGLVVARR DDGSWSPPSA ISSFGLGWGA QAGGEFIDFI IVLRTREAIR TFGSNTHFVV GAGLSAAVGV
501: TGRAVEADIR AGSGGYAACY TYSCSKGAFV GCSLEGSIFT TRTSENSRFY GSQSLAASDI LLGSLPKPPA AAPLYRALGD LFQKMGSETT RSSTTSSFSE
601: D

Best Arabidopsis Sequence Match ( AT1G29800.1 )
(BLAST)

001: MDERDREIRA SHGDSNAGNV VSQSIENTRE EDSGSCEGFV EESKRLEPEQ QKHGKYFFYD TPLSEETGVW IPVSVPPMLE PDHEEWSRGL SFNGGYFPEG
101: DMGWDQIFDE DKELTMWDVI VDMLLAARGK ASALSSGNLE RCGINFLSGH LLEQAWQDMA HTLTEANFGN AREILETEPP KWLPDSAASA CMLCSVRFHP
201: IMCSRHHCRY CGGIFCRDCS KGKSLVPVKF RVSDPQRVCD VCFVRLESVQ PYLMDQVSPA AQLPTHDLTD LSTLRSWVNF PWGQSMEYEI YKATNTLRGY
301: ITKVGSSRTE RSIPDAILRQ AKGLAVITVA RVGVMVTYKI GTGLVVARRD DGSWSPPSAI SSFGLGWGAQ AGGEFIDFII VLRTREAIQT FGSNTHLVVG
401: AGLSAAVGVT GRAVEADIRA GSGGYAACYT YSCSKGAFVG CSLEGSIFTT RTSENSRFYG SQSLAASDIL LGSLPRPPAA AALYRALGDL YQKMGSETVR
501: SPAISPLSED

Arabidopsis Description

RING/FYVE/PHD-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q84WW7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.