Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g071980.2.1 | Tomato | cytosol | 92.9 | 92.9 |
| GSMUA_Achr5P06610_001 | Banana | cytosol | 46.52 | 66.74 |
| VIT_10s0003g01800.t01 | Wine grape | cytosol | 49.57 | 65.14 |
| KRH21202 | Soybean | cytosol | 50.29 | 64.26 |
| AT1G29800.1 | Thale cress | cytosol | 47.39 | 64.12 |
| KRH11072 | Soybean | cytosol | 49.57 | 63.33 |
| GSMUA_Achr7P13820_001 | Banana | cytosol | 47.25 | 62.21 |
| EES04807 | Sorghum | cytosol | 42.61 | 55.26 |
| Bra032337.1-P | Field mustard | cytosol | 47.97 | 55.07 |
| TraesCS7D01G367900.1 | Wheat | cytosol | 42.17 | 55.01 |
| Zm00001d053541_P002 | Maize | cytosol | 41.45 | 54.89 |
| Os02t0233100-01 | Rice | cytosol | 42.17 | 54.39 |
| TraesCS7B01G272800.1 | Wheat | cytosol | 41.45 | 54.27 |
| TraesCS7A01G354900.1 | Wheat | cytosol | 41.45 | 54.06 |
| CDX99856 | Canola | cytosol | 49.28 | 53.71 |
| EER89914 | Sorghum | cytosol | 41.01 | 53.0 |
| Zm00001d016234_P001 | Maize | cytosol | 40.87 | 52.91 |
| CDY26313 | Canola | cytosol | 48.26 | 52.69 |
| Os06t0552400-02 | Rice | cytosol | 41.59 | 52.28 |
| HORVU7Hr1G088960.1 | Barley | endoplasmic reticulum | 41.88 | 47.61 |
| Zm00001d046304_P001 | Maize | cytosol, plastid | 40.29 | 40.0 |
| PGSC0003DMT400041172 | Potato | cytosol | 2.46 | 32.08 |
Protein Annotations
| EntrezGene:102592270 | Gene3D:3.30.40.10 | MapMan:35.2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 |
| InterPro:IPR013083 | InterPro:IPR017455 | UniProt:M1CRF7 | PFAM:PF01363 | PFAM:PF04366 | EnsemblPlantsGene:PGSC0003DMG400028413 |
| PGSC:PGSC0003DMG400028413 | EnsemblPlants:PGSC0003DMT400073054 | PFscan:PS50178 | PANTHER:PTHR15629 | PANTHER:PTHR15629:SF9 | SMART:SM00064 |
| SUPFAM:SSF57903 | UniParc:UPI000295521C | RefSeq:XP_006358086.1 | InterPro:Ysc84_actin-binding | InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel |
| InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
Zinc ion binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400028413]
Coordinates
chr2:+:31399657..31405481
Molecular Weight (calculated)
76019.0 Da
IEP (calculated)
4.907
GRAVY (calculated)
-0.439
Length
690 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPHHNSDSK FATPGEVDPS STSYSRVSNP LLQSDCSKFG DSTGLDDFEP VICSNIVKTG KHEEYNRVAV HLMNEIPENT SSMSRLDTQA EELFSKQSFQ
101: DTREASERYH MDGWKEESEE DSITLRQNNI LRSSEKIISS NWDERGKCGS ESFGQSAGHV NNDKSYIMGK PMGGQQETDH DSPLCTKENY EKGAHTTNGM
201: VKAEVSNVNL IQETNESDIK RNLLYPQLTE NIECETQSSQ NVDGSMCHQN QEKYFCYDSP LFGETGSWIP VSVPPMSKSE HDEWSRGFCS NGRYLPEGDT
301: DWNQCMGEDK ELTMWDVVLD MLLAARGKVH SLASGDIVGN MAWISSHLVE QAWKEMAQTL TEANFGNAQE ILEADPPKWL PDSASSTCML CNVRFHPIMC
401: SRHHCRFCGG LFCNECTKGR SLLPEKFCTG EPQRVCDVCC VRLESVQPYL MDQVSRAAQL PTHDLTDLST LRSWVNFPWG QSMEYEIYKA ANTIRGYEKI
501: GILSSEKKIP EAILQNARGL AILTVVKVGV MVTYNVGTGL VIARREDGSW SPPSAISSFG VGWGAQAGGE LTDFIIVLRT TDAVKTFGGD AHLSFGAGVS
601: AAAGIIGRTA EADLRAGTGG YAACYTYSCS KGAFVGCSLQ GSVVTTRTRE NSRFYGSQSI KASEILLGSL PNPPAAATLY RALTDLYQKL
101: DTREASERYH MDGWKEESEE DSITLRQNNI LRSSEKIISS NWDERGKCGS ESFGQSAGHV NNDKSYIMGK PMGGQQETDH DSPLCTKENY EKGAHTTNGM
201: VKAEVSNVNL IQETNESDIK RNLLYPQLTE NIECETQSSQ NVDGSMCHQN QEKYFCYDSP LFGETGSWIP VSVPPMSKSE HDEWSRGFCS NGRYLPEGDT
301: DWNQCMGEDK ELTMWDVVLD MLLAARGKVH SLASGDIVGN MAWISSHLVE QAWKEMAQTL TEANFGNAQE ILEADPPKWL PDSASSTCML CNVRFHPIMC
401: SRHHCRFCGG LFCNECTKGR SLLPEKFCTG EPQRVCDVCC VRLESVQPYL MDQVSRAAQL PTHDLTDLST LRSWVNFPWG QSMEYEIYKA ANTIRGYEKI
501: GILSSEKKIP EAILQNARGL AILTVVKVGV MVTYNVGTGL VIARREDGSW SPPSAISSFG VGWGAQAGGE LTDFIIVLRT TDAVKTFGGD AHLSFGAGVS
601: AAAGIIGRTA EADLRAGTGG YAACYTYSCS KGAFVGCSLQ GSVVTTRTRE NSRFYGSQSI KASEILLGSL PNPPAAATLY RALTDLYQKL
001: MDERDREIRA SHGDSNAGNV VSQSIENTRE EDSGSCEGFV EESKRLEPEQ QKHGKYFFYD TPLSEETGVW IPVSVPPMLE PDHEEWSRGL SFNGGYFPEG
101: DMGWDQIFDE DKELTMWDVI VDMLLAARGK ASALSSGNLE RCGINFLSGH LLEQAWQDMA HTLTEANFGN AREILETEPP KWLPDSAASA CMLCSVRFHP
201: IMCSRHHCRY CGGIFCRDCS KGKSLVPVKF RVSDPQRVCD VCFVRLESVQ PYLMDQVSPA AQLPTHDLTD LSTLRSWVNF PWGQSMEYEI YKATNTLRGY
301: ITKVGSSRTE RSIPDAILRQ AKGLAVITVA RVGVMVTYKI GTGLVVARRD DGSWSPPSAI SSFGLGWGAQ AGGEFIDFII VLRTREAIQT FGSNTHLVVG
401: AGLSAAVGVT GRAVEADIRA GSGGYAACYT YSCSKGAFVG CSLEGSIFTT RTSENSRFYG SQSLAASDIL LGSLPRPPAA AALYRALGDL YQKMGSETVR
501: SPAISPLSED
101: DMGWDQIFDE DKELTMWDVI VDMLLAARGK ASALSSGNLE RCGINFLSGH LLEQAWQDMA HTLTEANFGN AREILETEPP KWLPDSAASA CMLCSVRFHP
201: IMCSRHHCRY CGGIFCRDCS KGKSLVPVKF RVSDPQRVCD VCFVRLESVQ PYLMDQVSPA AQLPTHDLTD LSTLRSWVNF PWGQSMEYEI YKATNTLRGY
301: ITKVGSSRTE RSIPDAILRQ AKGLAVITVA RVGVMVTYKI GTGLVVARRD DGSWSPPSAI SSFGLGWGAQ AGGEFIDFII VLRTREAIQT FGSNTHLVVG
401: AGLSAAVGVT GRAVEADIRA GSGGYAACYT YSCSKGAFVG CSLEGSIFTT RTSENSRFYG SQSLAASDIL LGSLPRPPAA AALYRALGDL YQKMGSETVR
501: SPAISPLSED
Arabidopsis Description
RING/FYVE/PHD-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q84WW7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.