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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 3
  • endoplasmic reticulum 6
  • extracellular 4
  • vacuole 3
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, secretory
BaCelLo:cytosol
EpiLoc:endoplasmic reticulum
MultiLoc:extracellular
Plant-mPloc:cytosol, endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:endoplasmic reticulum
 endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH02329 Soybean endoplasmic reticulum, extracellular 99.48 99.48
KRH37008 Soybean endoplasmic reticulum 96.89 96.89
KRH11980 Soybean endoplasmic reticulum, extracellular 96.89 96.89
KRH68446 Soybean endoplasmic reticulum 93.78 93.78
EES00709 Sorghum endoplasmic reticulum, extracellular 93.26 93.26
Zm00001d040752_P001 Maize endoplasmic reticulum, extracellular 93.26 93.26
KRG96730 Soybean endoplasmic reticulum 93.26 93.26
Os01t0338000-01 Rice plasma membrane 92.75 92.75
TraesCS3A01G193800.1 Wheat golgi 92.75 92.75
TraesCS3B01G221700.1 Wheat endoplasmic reticulum, extracellular 92.75 92.75
TraesCS3D01G196200.1 Wheat endoplasmic reticulum, extracellular 92.23 92.23
TraesCS5A01G089200.1 Wheat golgi 91.71 91.71
KRH50760 Soybean endoplasmic reticulum 91.71 91.71
KXG23692 Sorghum endoplasmic reticulum, extracellular 91.71 91.71
KRH02328 Soybean endoplasmic reticulum 91.19 91.19
KRG92955 Soybean endoplasmic reticulum, extracellular 91.19 91.19
KRH33832 Soybean endoplasmic reticulum 91.19 91.19
TraesCS5D01G101300.1 Wheat golgi 91.19 91.19
Os12t0560300-01 Rice plasma membrane 91.19 91.19
TraesCS5B01G095200.1 Wheat endoplasmic reticulum, extracellular 90.67 90.67
TraesCS3B01G203800.1 Wheat endoplasmic reticulum 89.64 89.64
HORVU3Hr1G035000.2 Barley plasma membrane 89.64 89.64
TraesCS3A01G172900.1 Wheat golgi 89.64 89.64
Zm00001d040278_P001 Maize extracellular 89.12 89.12
EES02699 Sorghum endoplasmic reticulum, extracellular 89.12 89.12
Os01t0254000-01 Rice plasma membrane 89.12 89.12
TraesCS3D01G179300.1 Wheat endoplasmic reticulum, extracellular 89.64 86.07
TraesCS7B01G236300.1 Wheat cytosol 79.27 79.27
TraesCS7D01G332100.1 Wheat endoplasmic reticulum 78.24 78.24
HORVU7Hr1G080190.1 Barley endoplasmic reticulum 78.24 78.24
EES15193 Sorghum endoplasmic reticulum 77.72 76.92
KXG28257 Sorghum endoplasmic reticulum 77.2 76.8
Os06t0225000-00 Rice endoplasmic reticulum 77.2 76.8
Zm00001d049068_P001 Maize cytosol 76.17 75.77
HORVU3Hr1G045150.3 Barley plastid 76.68 66.37
Zm00001d009211_P001 Maize mitochondrion 93.26 55.05
KRG91118 Soybean extracellular 23.32 35.71
KRH58117 Soybean endoplasmic reticulum 33.68 35.33
KRH28350 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 32.64 34.24
KRH77133 Soybean endoplasmic reticulum 32.64 34.24
KRH17349 Soybean cytosol 32.12 33.7
KRH72981 Soybean cytosol 32.12 33.7
Protein Annotations
EntrezGene:100810637MapMan:22.4.2.1Gene3D:3.40.50.300EMBL:ACUP02004715EnsemblPlantsGene:GLYMA_07G241800GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005525GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005794GO:GO:0006810GO:GO:0006886GO:GO:0008150
GO:GO:0015031GO:GO:0016192UniProt:I1KMT1InterPro:IPR006687EnsemblPlants:KRH50759ProteinID:KRH50759
ProteinID:KRH50759.1InterPro:P-loop_NTPasePFAM:PF00025PRINTS:PR00328PFscan:PS51422PANTHER:PTHR11711
PANTHER:PTHR11711:SF165SMART:SM00177SMART:SM00178SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPase_ARF/SAR
InterPro:Small_GTPase_SAR1TIGRFAMs:TIGR00231UniParc:UPI0002338ABE:::
Description
hypothetical protein
Coordinates
chr7:+:42177741..42180288
Molecular Weight (calculated)
22120.7 Da
IEP (calculated)
7.074
GRAVY (calculated)
-0.168
Length
193 amino acids
Sequence
(BLAST)
001: MFFFDWFYGI LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQVARRV WKDYYAKVDA VVYLVDAFDK
101: ERFAESKKEL DALLSDESLA NVPFLVLGNK IDIPYAASEE ELRYHLGLTN FTTGKGKVNL TESNLRPLEV FMCSIVRKMG YGDGFQWVSQ YIK
Best Arabidopsis Sequence Match ( AT4G02080.1 )
(BLAST)
001: MFMIDWFYGV LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKKEL DALLSDESLA SVPFLILGNK IDIPYAASED ELRYHLGLSN FTTGKGKVNL TDSNVRPLEV FMCSIVRKMG YGEGFKWVSQ YIK
Arabidopsis Description
SAR1ASAR2 [Source:UniProtKB/TrEMBL;Acc:A0A178V5S8]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.