Factsheet for Solyc06g073080.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069218	Potato	cytosol	95.31	89.18
Solyc03g080190.2.1	Tomato	cytosol, peroxisome, plastid	78.75	74.78
KRH64291	Soybean	cytosol	75.0	71.01
KRH53636	Soybean	cytosol	74.06	70.12
VIT_13s0047g00210.t01	Wine grape	cytosol	69.69	66.17
AT5G24530.1	Thale cress	mitochondrion	65.62	61.58
CDX88109	Canola	mitochondrion	65.62	61.58
CDY05412	Canola	mitochondrion	65.62	61.58
CDX80450	Canola	mitochondrion	65.31	61.29
Os03t0122300-01	Rice	cytosol	65.31	61.11
Bra029414.1-P	Field mustard	plastid	65.0	61.0
CDY05445	Canola	plastid	65.0	61.0
EER92960	Sorghum	cytosol	63.12	60.12
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	62.5	59.35
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	63.12	59.24
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	62.19	59.05
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	62.19	59.05
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	62.5	59.0
HORVU4Hr1G084810.2	Barley	cytosol, peroxisome, plastid	61.88	58.93
TraesCS4D01G341800.1	Wheat	cytosol	61.88	58.93
EER94585	Sorghum	cytosol	61.56	58.63
TraesCS4B01G346900.1	Wheat	cytosol	61.25	58.33
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	63.75	57.79
GSMUA_Achr1P00770_001	Banana	cytosol	60.31	57.27
Zm00001d029744_P001	Maize	cytosol	59.38	56.55
KXG26978	Sorghum	cytosol	60.0	55.98
Os04t0581000-01	Rice	cytosol	59.38	55.88
TraesCS2D01G392800.1	Wheat	cytosol	58.44	55.0
TraesCS2A01G395000.1	Wheat	cytosol	57.81	54.41
GSMUA_Achr5P12830_001	Banana	cytosol	57.5	54.28
HORVU0Hr1G005300.1	Barley	cytosol	57.19	53.82
TraesCS2B01G413000.1	Wheat	cytosol, nucleus, peroxisome	57.19	53.82
Zm00001d027423_P002	Maize	cytosol, nucleus, peroxisome	61.88	53.66
TraesCS5A01G515600.2	Wheat	cytosol	61.88	51.56
Bra009771.1-P	Field mustard	mitochondrion	62.5	47.85
Solyc06g083910.2.1	Tomato	cytosol	36.88	35.01
Solyc02g070080.2.1	Tomato	cytosol	37.5	34.78
Solyc03g096050.2.1	Tomato	cytosol	37.5	33.61
Solyc09g008560.2.1	Tomato	cytosol	39.06	33.07
Solyc07g043420.2.1	Tomato	cytosol	35.31	33.04
Solyc11g010410.1.1	Tomato	cytosol	34.69	33.04
Solyc09g066310.2.1	Tomato	cytosol	33.75	32.83
Solyc09g066320.1.1	Tomato	cytosol, nucleus, peroxisome	31.56	32.79
Solyc10g018190.1.1	Tomato	cytosol	33.44	32.72
Solyc11g010400.1.1	Tomato	cytosol	33.44	31.85
Solyc10g076660.1.1	Tomato	cytosol	35.94	31.51
Solyc06g073580.2.1	Tomato	cytosol	34.69	31.44
Solyc10g005120.1.1	Tomato	cytosol	32.81	31.44
Solyc10g085190.1.1	Tomato	cytosol	35.31	31.3
Solyc08g006770.2.1	Tomato	plastid	34.06	31.05
Solyc02g083860.2.1	Tomato	cytosol	35.0	30.94
Solyc07g054920.1.1	Tomato	cytoskeleton, cytosol, peroxisome, plastid	34.69	30.66
Solyc01g105660.2.1	Tomato	cytosol, plastid	34.06	30.53
Solyc10g018170.1.1	Tomato	cytosol	20.31	30.52
Solyc11g007890.1.1	Tomato	cytosol	35.62	30.48
Solyc11g013110.1.1	Tomato	cytosol, plastid	33.44	30.4
HORVU4Hr1G089330.2	Barley	plastid	40.94	30.11
Solyc07g054930.2.1	Tomato	cytosol, plastid	35.0	30.11
Solyc01g105650.2.1	Tomato	cytosol	33.44	30.06
Solyc11g072200.1.1	Tomato	cytosol, peroxisome, plastid	31.56	28.69
Solyc07g054870.2.1	Tomato	mitochondrion	35.62	28.15
Solyc07g054940.1.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	35.62	27.8
Solyc01g090140.1.1	Tomato	plastid	19.38	27.68
Solyc10g076670.1.1	Tomato	cytosol	17.81	25.56
Solyc08g080040.2.1	Tomato	cytosol	28.12	21.53

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	UniProt:K4C928	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF371	SUPFAM:SSF51197	EnsemblPlantsGene:Solyc06g073080.2	EnsemblPlants:Solyc06g073080.2.1
UniParc:UPI0002765BC6	:	:	:	:	:

Description

No Description!

Coordinates

chr6:-:45017961..45020918

Molecular Weight (calculated)

36395.3 Da

IEP (calculated)

5.401

GRAVY (calculated)

-0.356

Length

320 amino acids

Sequence
(BLAST)

001: MMTTTSVLSS GFNHSTLPQS YVRPESQRPC MSEVVDSDDL VPVIDMSCTD RNVIVHQIGE ACRLYGFFQV INHGVSKKAM DEMLGTMRLS TSFNVKKETV
101: HNWRDYLRLH CYPLDKYAPE WPSNPPSFRE IVSKYCMEVR ELGYRLEEAI SESLGLEKDC IKNVLGEQGQ HMAINFYPQC PQPELTYGLP AHTDPNAITI
201: LLQDLQVAGL QVLKDGKWLS IKPQPNAFVI NLGDQLEALS NGKYKSIWHR AIVNSDKARM SVASFLCPND CSIISAPKTL TEDGSSAIYR DFTYAEYYEK
301: FWSRNLDQEY CLELFKNDGT

Best Arabidopsis Sequence Match ( AT5G24530.1 )
(BLAST)

001: MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N

Arabidopsis Description

DMR6Protein DOWNY MILDEW RESISTANCE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.