Factsheet for TraesCS4B01G346900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G341800.1	Wheat	cytosol	98.51	98.51
HORVU4Hr1G084810.2	Barley	cytosol, peroxisome, plastid	93.75	93.75
TraesCS5A01G515600.2	Wheat	cytosol	97.62	85.42
Os03t0122300-01	Rice	cytosol	82.44	80.99
EER92960	Sorghum	cytosol	79.46	79.46
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	71.73	71.51
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	71.73	71.09
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	70.83	70.62
Zm00001d027423_P002	Maize	cytosol, nucleus, peroxisome	77.38	70.46
TraesCS2B01G413000.1	Wheat	cytosol, nucleus, peroxisome	69.94	69.12
GSMUA_Achr5P12830_001	Banana	cytosol	68.15	67.55
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	67.26	67.06
PGSC0003DMT400001570	Potato	cytosol	66.07	65.88
GSMUA_Achr1P00770_001	Banana	cytosol	65.77	65.58
Solyc03g080190.2.1	Tomato	cytosol, peroxisome, plastid	64.29	64.09
KRH53636	Soybean	cytosol	64.29	63.91
KRH64291	Soybean	cytosol	64.29	63.91
VIT_13s0047g00210.t01	Wine grape	cytosol	63.99	63.8
PGSC0003DMT400069218	Potato	cytosol	63.99	62.87
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	62.5	62.13
CDY05445	Canola	plastid	62.2	61.29
Bra029414.1-P	Field mustard	plastid	62.2	61.29
Solyc06g073080.2.1	Tomato	plastid	58.33	61.25
AT5G24530.1	Thale cress	mitochondrion	61.01	60.12
CDY05412	Canola	mitochondrion	60.71	59.82
CDX88109	Canola	mitochondrion	60.71	59.82
CDX80450	Canola	mitochondrion	59.52	58.65
TraesCS2B01G412900.1	Wheat	plastid	52.08	50.14
Bra009771.1-P	Field mustard	mitochondrion	58.33	46.89
TraesCS7B01G063700.1	Wheat	plastid	36.9	37.13
TraesCS1B01G052600.1	Wheat	cytosol	38.1	36.99
TraesCS3B01G486500.1	Wheat	cytosol	36.9	35.53
TraesCS3B01G479500.1	Wheat	cytosol	36.31	35.06
TraesCS3B01G444500.1	Wheat	cytosol	35.71	34.99
TraesCS6B01G046800.1	Wheat	plastid	36.01	34.97
TraesCS1B01G088600.1	Wheat	cytoskeleton, cytosol, peroxisome	37.2	34.92
TraesCS4B01G344800.1	Wheat	cytosol	33.63	34.88
TraesCS2B01G568800.1	Wheat	cytosol, nucleus, peroxisome	33.04	33.84
TraesCS6B01G318000.1	Wheat	plastid	34.23	33.82
TraesCS6B01G318100.1	Wheat	plastid	34.52	33.82
TraesCS4B01G344900.1	Wheat	cytosol, plastid	30.65	33.33
TraesCS6B01G044600.1	Wheat	cytosol	34.52	33.33
TraesCS6B01G317900.1	Wheat	cytosol	26.79	33.33
TraesCS4B01G195000.1	Wheat	cytosol	36.31	33.15
TraesCS4B01G003300.1	Wheat	plastid	37.8	32.82
TraesCS7B01G020000.1	Wheat	plastid	33.63	32.66
TraesCS6B01G362100.1	Wheat	cytosol	32.14	32.34
TraesCS3B01G383900.1	Wheat	cytosol	35.42	31.9
TraesCS2B01G613300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	33.04	31.81
TraesCS2B01G514200.1	Wheat	cytosol, nucleus, peroxisome	30.95	31.8
TraesCS6B01G047100.1	Wheat	extracellular, vacuole	32.74	31.61
TraesCS4B01G328300.1	Wheat	cytosol	25.0	31.34
TraesCS2B01G568900.1	Wheat	mitochondrion, plastid	30.95	30.95
TraesCS5B01G153100.1	Wheat	cytosol, nucleus, peroxisome	33.63	30.87
TraesCS6B01G048100.1	Wheat	plastid	30.36	30.63
TraesCS7B01G180300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	36.31	30.2
TraesCS2B01G521500.1	Wheat	golgi	33.33	29.63
TraesCS5B01G053400.2	Wheat	cytosol	33.33	28.35
TraesCS3B01G351600.1	Wheat	cytosol	30.06	28.13
TraesCS2B01G613000.1	Wheat	cytosol, extracellular, peroxisome	30.06	28.06
TraesCS6B01G006200.1	Wheat	cytosol	31.25	23.86

Protein Annotations

EnsemblPlants:TraesCS4B01G346900.1	EnsemblPlantsGene:TraesCS4B01G346900	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF389	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SUPFAM:SSF51197	MapMan:9.2.2.3.1	:	:	:

Description

No Description!

Coordinates

chr4B:+:640532917..640536498

Molecular Weight (calculated)

38193.9 Da

IEP (calculated)

6.944

GRAVY (calculated)

-0.300

Length

336 amino acids

Sequence
(BLAST)

001: MAEQLISTAV HHTLPDSYVR SEADRPRLDE VVPDADIPVV DLANPDRAAV VAQIGAACSS HGFFQVLNHG LPLEVMLAAM AVAHDFFRLS PEEKAKLYSD
101: DPAKKMRLST SFNVRKETVH NWRDYLRLHC HPLEQFVPEW PANPPPFRDV MSTYCKEVRQ LGFRLYAMII VGLGLEQDYI KKVLGEQEQH MAVNFYPKCP
201: SPELTYGLPA HTDPNALTIL MMDEQVAGLQ VLKEGRWIAV NPRPNALVIN LGDQLQALSN GRYKSVWHRA VVNSDKPRMS IASFLCPCNS VKLGPAEKLI
301: GEKSPAVYRN YTYDEYYKKF WSRNLDQEHC LELFRT

Best Arabidopsis Sequence Match ( AT5G24530.1 )
(BLAST)

001: MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N

Arabidopsis Description

DMR6Protein DOWNY MILDEW RESISTANCE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.