Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G058700.2 | Wheat | cytosol | 83.54 | 87.53 |
| TraesCS5A01G048400.1 | Wheat | cytosol | 73.16 | 85.0 |
| HORVU5Hr1G011540.3 | Barley | cytosol | 75.7 | 78.07 |
| TraesCS3B01G351600.1 | Wheat | cytosol | 56.2 | 61.84 |
| OQU80974 | Sorghum | cytosol, mitochondrion, peroxisome, plastid | 58.73 | 60.89 |
| GSMUA_Achr9P15020_001 | Banana | cytosol | 42.53 | 47.86 |
| VIT_18s0001g06690.t01 | Wine grape | cytosol | 34.18 | 40.18 |
| KRH53489 | Soybean | cytosol | 36.46 | 39.78 |
| Solyc01g105650.2.1 | Tomato | cytosol | 33.16 | 36.8 |
| TraesCS4B01G346900.1 | Wheat | cytosol | 28.35 | 33.33 |
| TraesCS6B01G046800.1 | Wheat | plastid | 28.86 | 32.95 |
| PGSC0003DMT400083728 | Potato | cytosol | 13.92 | 32.93 |
| TraesCS2B01G412900.1 | Wheat | plastid | 28.35 | 32.09 |
| TraesCS2B01G413000.1 | Wheat | cytosol, nucleus, peroxisome | 26.58 | 30.88 |
| TraesCS4B01G344900.1 | Wheat | cytosol, plastid | 24.05 | 30.74 |
| TraesCS1B01G052600.1 | Wheat | cytosol | 26.33 | 30.06 |
| TraesCS3B01G444500.1 | Wheat | cytosol | 25.82 | 29.74 |
| TraesCS6B01G044600.1 | Wheat | cytosol | 26.08 | 29.6 |
| TraesCS4B01G003300.1 | Wheat | plastid | 28.86 | 29.46 |
| TraesCS2B01G514200.1 | Wheat | cytosol, nucleus, peroxisome | 24.3 | 29.36 |
| TraesCS2B01G568800.1 | Wheat | cytosol, nucleus, peroxisome | 23.8 | 28.66 |
| TraesCS2B01G568900.1 | Wheat | mitochondrion, plastid | 24.3 | 28.57 |
| TraesCS6B01G362100.1 | Wheat | cytosol | 24.05 | 28.44 |
| TraesCS4B01G344800.1 | Wheat | cytosol | 23.04 | 28.09 |
| TraesCS4B01G328300.1 | Wheat | cytosol | 18.99 | 27.99 |
| TraesCS7B01G063700.1 | Wheat | plastid | 23.54 | 27.84 |
| TraesCS7B01G020000.1 | Wheat | plastid | 24.3 | 27.75 |
| TraesCS3B01G479500.1 | Wheat | cytosol | 24.05 | 27.3 |
| TraesCS3B01G486500.1 | Wheat | cytosol | 24.05 | 27.22 |
| TraesCS3B01G383900.1 | Wheat | cytosol | 25.57 | 27.08 |
| TraesCS6B01G318000.1 | Wheat | plastid | 23.04 | 26.76 |
| TraesCS6B01G048100.1 | Wheat | plastid | 22.53 | 26.73 |
| TraesCS7B01G180300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 27.09 | 26.49 |
| TraesCS6B01G047100.1 | Wheat | extracellular, vacuole | 23.29 | 26.44 |
| TraesCS6B01G318100.1 | Wheat | plastid | 22.78 | 26.24 |
| TraesCS2B01G613300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 22.78 | 25.79 |
| TraesCS2B01G613000.1 | Wheat | cytosol, extracellular, peroxisome | 23.29 | 25.56 |
| TraesCS6B01G317900.1 | Wheat | cytosol | 17.47 | 25.56 |
| TraesCS5B01G153100.1 | Wheat | cytosol, nucleus, peroxisome | 23.54 | 25.41 |
| TraesCS4B01G195000.1 | Wheat | cytosol | 23.04 | 24.73 |
| TraesCS1B01G088600.1 | Wheat | cytoskeleton, cytosol, peroxisome | 22.28 | 24.58 |
| TraesCS2B01G521500.1 | Wheat | golgi | 23.04 | 24.07 |
| TraesCS6B01G006200.1 | Wheat | cytosol | 24.81 | 22.27 |
| Zm00001d042655_P001 | Maize | cytosol | 1.27 | 4.42 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G053400.2 | EnsemblPlantsGene:TraesCS5B01G053400 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF369 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | SEG:seg | SUPFAM:SSF51197 | MapMan:50.1.13 | : | : |
Description
No Description!
Coordinates
chr5B:-:58395460..58397538
Molecular Weight (calculated)
43039.6 Da
IEP (calculated)
6.186
GRAVY (calculated)
-0.202
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MQELPMPLKP TMRKLWKCIL CTEPCMDDVQ TVCQQIKPRQ TTTDLSSATP PRHMASPPSS PGQPSGTCSE DAIPVVDLAV LVNGDAGERS QAVQHLGRAC
101: QDWGFFMVTN HGVPEALQSA LMDACSELFS LPPEQKQEHM DAGPMDPVRV GTGFNSAVDG ARYWRDYVKM FAHPELHCPA KPDSLRGVAA EYAARTRGLL
201: LELTAAISES LGLHVGRIAE RLDLGSCFQI LVGNHYPPCA ADSDDDDGAI GLPAHSDHGL LTLLFQNGVD GLQVKHHGRW LLAKPLPGSF FVIAGDQLEI
301: VSNGRYKGVL HRALVDRAQA RMSCVSLLGP CLDAVVEPGP ELAVPPLGLE FRGVKYRDYM EHQQSNKLNE KGALDLVRVQ RHIHTTDTLC SSSIY
101: QDWGFFMVTN HGVPEALQSA LMDACSELFS LPPEQKQEHM DAGPMDPVRV GTGFNSAVDG ARYWRDYVKM FAHPELHCPA KPDSLRGVAA EYAARTRGLL
201: LELTAAISES LGLHVGRIAE RLDLGSCFQI LVGNHYPPCA ADSDDDDGAI GLPAHSDHGL LTLLFQNGVD GLQVKHHGRW LLAKPLPGSF FVIAGDQLEI
301: VSNGRYKGVL HRALVDRAQA RMSCVSLLGP CLDAVVEPGP ELAVPPLGLE FRGVKYRDYM EHQQSNKLNE KGALDLVRVQ RHIHTTDTLC SSSIY
001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.