Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G331400.1 | Wheat | plastid | 94.61 | 94.61 |
| TraesCS6D01G310700.1 | Wheat | plastid | 94.61 | 94.61 |
| Os02t0767300-01 | Rice | cytosol | 76.95 | 77.64 |
| EES07584 | Sorghum | cytosol | 74.55 | 75.0 |
| Zm00001d018181_P001 | Maize | endoplasmic reticulum, nucleus | 70.36 | 74.6 |
| Zm00001d018184_P001 | Maize | endoplasmic reticulum | 70.36 | 74.6 |
| TraesCS4B01G344900.1 | Wheat | cytosol, plastid | 67.07 | 72.49 |
| TraesCS4B01G344800.1 | Wheat | cytosol | 69.46 | 71.6 |
| HORVU6Hr1G080360.1 | Barley | plastid | 71.86 | 68.57 |
| HORVU6Hr1G056710.2 | Barley | cytosol, peroxisome | 13.47 | 62.5 |
| EES00073 | Sorghum | cytosol | 55.99 | 60.71 |
| GSMUA_Achr10P... | Banana | cytosol | 55.09 | 58.79 |
| GSMUA_Achr3P07030_001 | Banana | cytosol | 58.08 | 58.26 |
| GSMUA_Achr8P23330_001 | Banana | cytosol | 57.19 | 57.36 |
| GSMUA_Achr10P... | Banana | cytosol | 57.48 | 57.31 |
| VIT_18s0001g03470.t01 | Wine grape | cytosol | 54.49 | 56.52 |
| VIT_18s0001g03490.t01 | Wine grape | cytosol | 53.59 | 53.43 |
| AT5G08640.1 | Thale cress | cytosol | 53.59 | 53.27 |
| CDX69931 | Canola | cytoskeleton, cytosol, peroxisome | 53.29 | 52.98 |
| CDY21556 | Canola | cytoskeleton, cytosol, peroxisome | 53.29 | 52.98 |
| Bra009358.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 53.29 | 52.98 |
| KRH18787 | Soybean | cytosol | 52.4 | 52.4 |
| KRH53203 | Soybean | cytosol | 52.1 | 52.25 |
| Solyc11g013110.1.1 | Tomato | cytosol, plastid | 53.89 | 51.14 |
| PGSC0003DMT400036565 | Potato | cytosol | 53.59 | 50.85 |
| KRH16579 | Soybean | cytosol, mitochondrion | 44.61 | 49.34 |
| Bra018076.1-P | Field mustard | cytosol | 41.62 | 45.57 |
| CDY48154 | Canola | cytosol | 41.32 | 45.25 |
| AT5G63590.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 41.62 | 45.13 |
| CDY39565 | Canola | cytosol | 40.72 | 44.59 |
| CDY41522 | Canola | cytosol | 38.92 | 43.77 |
| Bra038648.1-P | Field mustard | cytosol | 38.92 | 43.77 |
| CDY39860 | Canola | cytosol | 40.12 | 43.37 |
| CDY31361 | Canola | cytosol | 39.82 | 42.9 |
| Bra029211.1-P | Field mustard | cytosol | 39.52 | 42.58 |
| CDY69013 | Canola | cytosol | 38.32 | 41.69 |
| AT5G43935.1 | Thale cress | cytosol | 36.53 | 41.64 |
| Bra038647.1-P | Field mustard | cytosol | 38.02 | 41.37 |
| CDX97750 | Canola | cytosol | 27.25 | 41.18 |
| AT5G63595.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 33.83 | 40.5 |
| Bra037747.1-P | Field mustard | cytosol | 37.72 | 40.13 |
| AT5G63600.2 | Thale cress | cytosol | 38.62 | 39.57 |
| CDX81188 | Canola | cytosol | 37.72 | 39.38 |
| CDY41521 | Canola | cytosol, mitochondrion | 2.4 | 38.1 |
| CDY41520 | Canola | cytosol | 27.84 | 37.65 |
| AT5G63580.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 27.54 | 36.8 |
| TraesCS4B01G328300.1 | Wheat | cytosol | 29.34 | 36.57 |
| TraesCS1B01G088600.1 | Wheat | cytoskeleton, cytosol, peroxisome | 37.72 | 35.2 |
| TraesCS3B01G383900.1 | Wheat | cytosol | 39.22 | 35.12 |
| TraesCS4B01G195000.1 | Wheat | cytosol | 38.02 | 34.51 |
| TraesCS2B01G613000.1 | Wheat | cytosol, extracellular, peroxisome | 37.13 | 34.44 |
| TraesCS5B01G153100.1 | Wheat | cytosol, nucleus, peroxisome | 36.83 | 33.61 |
| TraesCS2B01G613300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 34.43 | 32.95 |
| TraesCS7B01G020000.1 | Wheat | plastid | 33.83 | 32.66 |
| TraesCS2B01G412900.1 | Wheat | plastid | 33.83 | 32.38 |
| Bra029212.1-P | Field mustard | cytosol | 40.72 | 32.23 |
| TraesCS4B01G346900.1 | Wheat | cytosol | 32.34 | 32.14 |
| CDY31363 | Canola | cytosol | 40.42 | 31.99 |
| TraesCS2B01G413000.1 | Wheat | cytosol, nucleus, peroxisome | 32.04 | 31.47 |
| TraesCS7B01G063700.1 | Wheat | plastid | 31.44 | 31.44 |
| TraesCS6B01G048100.1 | Wheat | plastid | 30.84 | 30.93 |
| TraesCS6B01G006200.1 | Wheat | cytosol | 40.42 | 30.68 |
| TraesCS2B01G521500.1 | Wheat | golgi | 34.43 | 30.42 |
| TraesCS1B01G052600.1 | Wheat | cytosol | 30.84 | 29.77 |
| TraesCS3B01G444500.1 | Wheat | cytosol | 30.24 | 29.45 |
| TraesCS6B01G318000.1 | Wheat | plastid | 29.64 | 29.12 |
| TraesCS6B01G317900.1 | Wheat | cytosol | 23.05 | 28.52 |
| TraesCS6B01G047100.1 | Wheat | extracellular, vacuole | 29.64 | 28.45 |
| TraesCS4B01G003300.1 | Wheat | plastid | 32.93 | 28.42 |
| TraesCS6B01G046800.1 | Wheat | plastid | 29.34 | 28.32 |
| TraesCS6B01G318100.1 | Wheat | plastid | 28.44 | 27.7 |
| VIT_18s0001g03510.t01 | Wine grape | cytosol | 54.49 | 26.76 |
| TraesCS3B01G479500.1 | Wheat | cytosol | 27.54 | 26.44 |
| TraesCS3B01G486500.1 | Wheat | cytosol | 27.54 | 26.36 |
| TraesCS2B01G514200.1 | Wheat | cytosol, nucleus, peroxisome | 25.75 | 26.3 |
| TraesCS3B01G351600.1 | Wheat | cytosol | 28.14 | 26.18 |
| TraesCS7B01G180300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 31.44 | 25.99 |
| TraesCS2B01G568800.1 | Wheat | cytosol, nucleus, peroxisome | 25.45 | 25.91 |
| TraesCS2B01G568900.1 | Wheat | mitochondrion, plastid | 25.15 | 25.0 |
| TraesCS6B01G044600.1 | Wheat | cytosol | 25.75 | 24.71 |
| TraesCS5B01G053400.2 | Wheat | cytosol | 28.44 | 24.05 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G362100.1 | EnsemblPlantsGene:TraesCS6B01G362100 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF165 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | SEG:seg | SUPFAM:SSF51197 | MapMan:9.2.2.5.1 | : | : |
Description
No Description!
Coordinates
chr6B:+:633858644..633859725
Molecular Weight (calculated)
36852.1 Da
IEP (calculated)
6.186
GRAVY (calculated)
-0.304
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGTAAQSVQ ALASSLGALP PEFVRPEHEQ PRATTFRGAA PPEIPVIDMS SPGAWRRMAE AAAEWGIFQV VCHGVPAEAV AELQRVGRGF FALPQEEKQR
101: YAMDPAEGKT EGYGSTLRKG DLEGKKAWAD FLFHNVAPPA AVNHAVWPES PEGYREANEA YCGHMLRLTR ELFGRLSAEL GLQEGAMAEA FGGDDVVLLQ
201: KINFYPPCPQ PELALGLAPH TDMSTLTVLL PDEVQGLQVF KDGCWYDVNY VPGALIIHIG DQIEIMSNGR YKAVLHRTTV SREKTRMSWP VFVEPPPEHA
301: VGPHPQLVTD EFAAKYKAKK FKDYKYCKIN KLPQ
101: YAMDPAEGKT EGYGSTLRKG DLEGKKAWAD FLFHNVAPPA AVNHAVWPES PEGYREANEA YCGHMLRLTR ELFGRLSAEL GLQEGAMAEA FGGDDVVLLQ
201: KINFYPPCPQ PELALGLAPH TDMSTLTVLL PDEVQGLQVF KDGCWYDVNY VPGALIIHIG DQIEIMSNGR YKAVLHRTTV SREKTRMSWP VFVEPPPEHA
301: VGPHPQLVTD EFAAKYKAKK FKDYKYCKIN KLPQ
001: MEVERVQDIS SSSLLTEAIP LEFIRSEKEQ PAITTFRGPT PAIPVVDLSD PDEESVRRAV VKASEEWGLF QVVNHGIPTE LIRRLQDVGR KFFELPSSEK
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD
Arabidopsis Description
FLS1Flavonol synthase/flavanone 3-hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q96330]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.