Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytoskeleton, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69931 | Canola | cytoskeleton, cytosol, peroxisome | 99.11 | 99.11 |
| AT5G08640.1 | Thale cress | cytosol | 91.96 | 91.96 |
| CDY41522 | Canola | cytosol | 57.44 | 64.98 |
| GSMUA_Achr3P07030_001 | Banana | cytosol | 63.99 | 64.56 |
| VIT_18s0001g03490.t01 | Wine grape | cytosol | 64.29 | 64.48 |
| VIT_18s0001g03470.t01 | Wine grape | cytosol | 60.71 | 63.35 |
| CDY48154 | Canola | cytosol | 57.14 | 62.95 |
| CDY69013 | Canola | cytosol | 57.14 | 62.54 |
| CDY39565 | Canola | cytosol | 56.25 | 61.97 |
| GSMUA_Achr10P... | Banana | cytosol | 57.14 | 61.34 |
| GSMUA_Achr10P... | Banana | cytosol | 61.01 | 61.19 |
| CDY41520 | Canola | cytosol | 44.64 | 60.73 |
| Solyc11g013110.1.1 | Tomato | cytosol, plastid | 63.1 | 60.23 |
| PGSC0003DMT400036565 | Potato | cytosol | 62.8 | 59.94 |
| CDY39860 | Canola | cytosol | 55.06 | 59.87 |
| KRH18787 | Soybean | cytosol | 58.93 | 59.28 |
| KRH53203 | Soybean | cytosol | 58.63 | 59.16 |
| CDY31361 | Canola | cytosol | 54.17 | 58.71 |
| GSMUA_Achr8P23330_001 | Banana | cytosol | 57.14 | 57.66 |
| CDX81188 | Canola | cytosol | 54.46 | 57.19 |
| KRH16579 | Soybean | cytosol, mitochondrion | 51.19 | 56.95 |
| Os02t0767300-01 | Rice | cytosol | 55.06 | 55.89 |
| CDX97750 | Canola | cytosol | 36.31 | 55.2 |
| TraesCS6D01G310700.1 | Wheat | plastid | 53.27 | 53.59 |
| TraesCS6B01G362100.1 | Wheat | cytosol | 52.98 | 53.29 |
| EES07584 | Sorghum | cytosol | 52.38 | 53.01 |
| TraesCS6A01G331400.1 | Wheat | plastid | 52.38 | 52.69 |
| CDY41521 | Canola | cytosol, mitochondrion | 3.27 | 52.38 |
| Zm00001d018181_P001 | Maize | endoplasmic reticulum, nucleus | 47.92 | 51.11 |
| Zm00001d018184_P001 | Maize | endoplasmic reticulum | 47.92 | 51.11 |
| TraesCS4D01G339800.1 | Wheat | cytosol, plastid | 50.89 | 50.89 |
| TraesCS4B01G344900.1 | Wheat | cytosol, plastid | 46.43 | 50.49 |
| HORVU6Hr1G056710.2 | Barley | cytosol, peroxisome | 10.71 | 50.0 |
| TraesCS5A01G513700.1 | Wheat | cytosol, plastid | 50.0 | 50.0 |
| TraesCS4B01G344800.1 | Wheat | cytosol | 47.92 | 49.69 |
| EES00073 | Sorghum | cytosol | 45.24 | 49.35 |
| CDY31363 | Canola | cytosol | 54.46 | 43.36 |
| HORVU6Hr1G080360.1 | Barley | plastid | 42.26 | 40.57 |
| CDY41286 | Canola | cytosol | 39.88 | 37.43 |
| CDY10816 | Canola | cytosol | 39.58 | 37.15 |
| CDX94133 | Canola | cytosol | 38.69 | 36.31 |
| CDY14476 | Canola | plastid | 37.5 | 35.69 |
| CDY07746 | Canola | plastid | 37.5 | 35.69 |
| CDX99549 | Canola | vacuole | 22.62 | 35.68 |
| CDY18399 | Canola | plastid | 36.9 | 35.03 |
| CDY68873 | Canola | plastid | 36.61 | 34.84 |
| CDX93319 | Canola | plastid | 36.61 | 34.84 |
| CDY04960 | Canola | cytosol | 38.1 | 34.41 |
| CDY02966 | Canola | cytosol | 37.2 | 34.34 |
| CDX80966 | Canola | cytosol | 37.8 | 34.14 |
| CDY11329 | Canola | cytosol | 37.8 | 34.14 |
| CDX86858 | Canola | cytosol | 34.23 | 33.92 |
| CDX76068 | Canola | cytosol | 36.9 | 33.88 |
| CDX98776 | Canola | cytosol | 39.58 | 33.84 |
| CDY34450 | Canola | cytosol | 33.93 | 33.33 |
| CDY14105 | Canola | cytosol, nucleus, peroxisome | 38.1 | 33.33 |
| CDY05103 | Canola | cytosol, nucleus, peroxisome | 34.52 | 33.05 |
| CDY32234 | Canola | cytosol, nucleus, peroxisome | 33.63 | 33.04 |
| CDX99548 | Canola | cytosol | 33.33 | 33.04 |
| CDX90761 | Canola | plastid | 33.93 | 32.57 |
| CDX99550 | Canola | cytosol | 32.44 | 31.96 |
| VIT_18s0001g03510.t01 | Wine grape | cytosol | 64.58 | 31.91 |
| CDY01001 | Canola | cytosol | 38.1 | 31.6 |
| CDY08545 | Canola | cytosol | 38.1 | 31.6 |
| CDY56988 | Canola | peroxisome | 33.33 | 31.37 |
| CDY42687 | Canola | peroxisome | 32.74 | 30.73 |
| CDY23457 | Canola | cytosol, nucleus, peroxisome | 32.44 | 30.62 |
| CDX80450 | Canola | mitochondrion | 30.95 | 30.5 |
| CDX90759 | Canola | cytosol | 27.38 | 30.46 |
| CDX88109 | Canola | mitochondrion | 30.65 | 30.21 |
| CDY30486 | Canola | cytosol, nucleus, peroxisome | 31.85 | 30.06 |
| CDX90656 | Canola | cytosol | 30.95 | 29.71 |
| CDY29008 | Canola | cytosol | 30.95 | 29.71 |
| CDX77983 | Canola | cytosol | 31.25 | 29.33 |
| CDX73739 | Canola | cytosol | 31.25 | 29.33 |
| CDY05445 | Canola | plastid | 29.76 | 29.33 |
| CDX74687 | Canola | cytosol | 31.25 | 29.25 |
| CDY05412 | Canola | mitochondrion | 29.46 | 29.03 |
| CDX75020 | Canola | cytosol | 30.65 | 27.99 |
| CDY65238 | Canola | cytosol, nucleus, peroxisome | 28.87 | 26.87 |
| CDX70044 | Canola | cytosol, nucleus, peroxisome | 28.87 | 26.87 |
| CDX76159 | Canola | cytoskeleton, cytosol, peroxisome | 22.62 | 25.94 |
| CDX72185 | Canola | nucleus | 36.9 | 24.6 |
| CDX76765 | Canola | cytosol | 16.67 | 23.53 |
| CDY27251 | Canola | nucleus | 35.71 | 19.32 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:9.2.2.5.1 | GO:A0A078G858 | UniProt:A0A078G858 | EnsemblPlants:CDY21556 | ProteinID:CDY21556 |
| ProteinID:CDY21556.1 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00016009001 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 |
| PANTHER:PTHR10209 | PANTHER:PTHR10209:SF382 | SUPFAM:SSF51197 | UniParc:UPI0004EBF3E2 | SEG:seg | : |
Description
BnaC09g47360DBnaC09g47360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G858]
Coordinates
chrLK032122:+:226157..228824
Molecular Weight (calculated)
38275.8 Da
IEP (calculated)
5.468
GRAVY (calculated)
-0.414
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIERVQDIS SSSLHTEAIP LEFIRSEKEQ PAITTFRGPV PAIPVVDLSD PDEESVARAV VKASEEWGIF QVVNHGIPTE LIKRLQEVGR TFFELPSSEK
101: ESVAKPVDAK DIEGYGTKLQ KEVEGKKAWV DHLFHRIWPP SCVNYSFWPK NPPEYREVNE EYALHVKKLS ETLLGILSEG LGLRREALRE GLGGDLAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKDRTRMSW PVFLEPHREM
301: IVGPLPELIS DDNPPKYKPF AFKDYSYRKL NKLPLD
101: ESVAKPVDAK DIEGYGTKLQ KEVEGKKAWV DHLFHRIWPP SCVNYSFWPK NPPEYREVNE EYALHVKKLS ETLLGILSEG LGLRREALRE GLGGDLAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKDRTRMSW PVFLEPHREM
301: IVGPLPELIS DDNPPKYKPF AFKDYSYRKL NKLPLD
001: MEVERVQDIS SSSLLTEAIP LEFIRSEKEQ PAITTFRGPT PAIPVVDLSD PDEESVRRAV VKASEEWGLF QVVNHGIPTE LIRRLQDVGR KFFELPSSEK
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD
Arabidopsis Description
FLS1Flavonol synthase/flavanone 3-hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q96330]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.