Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014716.1-P | Field mustard | cytosol | 97.53 | 96.99 |
| CDX76068 | Canola | cytosol | 97.25 | 96.72 |
| AT3G55970.1 | Thale cress | cytosol | 87.09 | 87.33 |
| VIT_13s0067g01020.t01 | Wine grape | cytosol | 63.46 | 64.35 |
| KRH14938 | Soybean | cytosol | 63.46 | 63.99 |
| KRH31155 | Soybean | cytosol | 62.36 | 62.88 |
| KRG97722 | Soybean | cytosol | 62.09 | 62.6 |
| CDX72185 | Canola | nucleus | 86.54 | 62.5 |
| CDY04960 | Canola | cytosol | 63.74 | 62.37 |
| Solyc03g096050.2.1 | Tomato | cytosol | 60.99 | 62.18 |
| PGSC0003DMT400031149 | Potato | cytosol | 60.44 | 61.8 |
| CDY11329 | Canola | cytosol | 62.64 | 61.29 |
| CDX80966 | Canola | cytosol | 62.36 | 61.02 |
| CDY14105 | Canola | cytosol, nucleus, peroxisome | 63.74 | 60.42 |
| KRH73197 | Soybean | cytosol | 62.36 | 60.05 |
| GSMUA_Achr6P15610_001 | Banana | cytosol | 56.59 | 58.52 |
| GSMUA_Achr7P15540_001 | Banana | cytosol | 54.4 | 55.93 |
| TraesCS1B01G088600.1 | Wheat | cytoskeleton, cytosol, peroxisome | 53.85 | 54.75 |
| CDY07746 | Canola | plastid | 52.75 | 54.39 |
| TraesCS1D01G072700.1 | Wheat | cytoskeleton, cytosol, peroxisome | 53.3 | 54.19 |
| EES18946 | Sorghum | cytosol | 54.4 | 54.1 |
| TraesCS1A01G070200.1 | Wheat | cytoskeleton, cytosol, peroxisome | 52.75 | 53.63 |
| CDY14476 | Canola | plastid | 51.92 | 53.54 |
| CDY18399 | Canola | plastid | 51.92 | 53.39 |
| Os01t0832600-01 | Rice | cytosol | 53.57 | 53.28 |
| CDY68873 | Canola | plastid | 51.65 | 53.26 |
| CDX93319 | Canola | plastid | 51.65 | 53.26 |
| HORVU1Hr1G015050.7 | Barley | cytosol, peroxisome | 53.02 | 53.17 |
| TraesCS3B01G383900.1 | Wheat | cytosol | 54.12 | 52.81 |
| TraesCS3D01G345600.1 | Wheat | cytosol | 54.67 | 52.65 |
| TraesCS3A01G351400.2 | Wheat | cytosol | 54.67 | 52.51 |
| TraesCS4A01G109200.1 | Wheat | cytosol | 53.02 | 52.45 |
| TraesCS4B01G195000.1 | Wheat | cytosol | 52.75 | 52.17 |
| CDY08545 | Canola | cytosol | 57.97 | 52.1 |
| Os05t0127500-01 | Rice | cytosol | 52.47 | 51.9 |
| HORVU4Hr1G056500.2 | Barley | cytosol, peroxisome, plastid | 52.75 | 51.75 |
| CDY01001 | Canola | cytosol | 57.42 | 51.6 |
| Zm00001d042980_P002 | Maize | cytosol | 52.75 | 51.34 |
| Zm00001d028744_P001 | Maize | cytosol | 53.02 | 51.33 |
| TraesCS4D01G195700.1 | Wheat | cytosol | 51.65 | 51.09 |
| Zm00001d035462_P001 | Maize | cytosol | 53.3 | 50.79 |
| EES01705 | Sorghum | cytosol | 53.85 | 50.52 |
| TraesCS4B01G328300.1 | Wheat | cytosol | 37.09 | 50.37 |
| CDY27251 | Canola | nucleus | 85.44 | 50.08 |
| EER92419 | Sorghum | cytosol | 51.92 | 49.35 |
| Os03t0289800-01 | Rice | cytosol | 51.65 | 48.58 |
| HORVU3Hr1G087570.4 | Barley | cytosol, peroxisome, plastid | 53.85 | 47.92 |
| Zm00001d047744_P001 | Maize | mitochondrion | 52.75 | 47.17 |
| Zm00001d012456_P004 | Maize | plastid | 53.3 | 41.1 |
| CDY32234 | Canola | cytosol, nucleus, peroxisome | 36.54 | 38.89 |
| CDY34450 | Canola | cytosol | 35.99 | 38.3 |
| CDY41520 | Canola | cytosol | 25.27 | 37.25 |
| CDX69931 | Canola | cytoskeleton, cytosol, peroxisome | 34.34 | 37.2 |
| CDY21556 | Canola | cytoskeleton, cytosol, peroxisome | 34.34 | 37.2 |
| CDY48154 | Canola | cytosol | 31.04 | 37.05 |
| CDY39565 | Canola | cytosol | 30.77 | 36.72 |
| CDY69013 | Canola | cytosol | 30.77 | 36.48 |
| CDY39860 | Canola | cytosol | 29.67 | 34.95 |
| CDX99549 | Canola | vacuole | 20.33 | 34.74 |
| CDY31361 | Canola | cytosol | 29.4 | 34.52 |
| CDY05445 | Canola | plastid | 32.14 | 34.31 |
| CDX90761 | Canola | plastid | 32.97 | 34.29 |
| CDY05412 | Canola | mitochondrion | 31.87 | 34.02 |
| CDY05103 | Canola | cytosol, nucleus, peroxisome | 32.69 | 33.9 |
| CDX81188 | Canola | cytosol | 29.67 | 33.75 |
| CDX88109 | Canola | mitochondrion | 31.59 | 33.72 |
| CDY41522 | Canola | cytosol | 27.47 | 33.67 |
| CDY41286 | Canola | cytosol | 32.97 | 33.52 |
| CDX80450 | Canola | mitochondrion | 31.32 | 33.43 |
| CDX86858 | Canola | cytosol | 31.04 | 33.33 |
| CDY10816 | Canola | cytosol | 32.69 | 33.24 |
| CDX99548 | Canola | cytosol | 30.77 | 33.04 |
| CDY30486 | Canola | cytosol, nucleus, peroxisome | 31.87 | 32.58 |
| CDY23457 | Canola | cytosol, nucleus, peroxisome | 31.59 | 32.3 |
| CDY56988 | Canola | peroxisome | 31.59 | 32.21 |
| CDX97750 | Canola | cytosol | 19.51 | 32.13 |
| CDX94133 | Canola | cytosol | 31.32 | 31.84 |
| CDX99550 | Canola | cytosol | 29.67 | 31.67 |
| CDY42687 | Canola | peroxisome | 31.04 | 31.56 |
| CDX90759 | Canola | cytosol | 26.1 | 31.46 |
| CDX74687 | Canola | cytosol | 30.77 | 31.2 |
| CDX77983 | Canola | cytosol | 29.95 | 30.45 |
| CDX75020 | Canola | cytosol | 30.77 | 30.43 |
| CDX90656 | Canola | cytosol | 29.12 | 30.29 |
| CDX73739 | Canola | cytosol | 29.67 | 30.17 |
| CDY29008 | Canola | cytosol | 28.57 | 29.71 |
| CDX98776 | Canola | cytosol | 31.59 | 29.26 |
| CDX70044 | Canola | cytosol, nucleus, peroxisome | 27.47 | 27.7 |
| CDY65238 | Canola | cytosol, nucleus, peroxisome | 27.2 | 27.42 |
| CDX76159 | Canola | cytoskeleton, cytosol, peroxisome | 20.6 | 25.6 |
| CDY31363 | Canola | cytosol | 29.67 | 25.59 |
| CDX76765 | Canola | cytosol | 16.48 | 25.21 |
| CDY41521 | Canola | cytosol, mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | GO:A0A078EP72 | EnsemblPlants:CDY02966 | ProteinID:CDY02966 | ProteinID:CDY02966.1 |
| InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00115257001 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase |
| PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF134 |
| SUPFAM:SSF51197 | UniParc:UPI0004EC5272 | : | : | : | : |
Description
BnaC04g25200D
Coordinates
chrLK031938:-:1138325..1142425
Molecular Weight (calculated)
41518.6 Da
IEP (calculated)
6.572
GRAVY (calculated)
-0.465
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MNIFQDWPEP IVRVQSLSES NLQAIPNRYV KPLAQRPNLL SENYHTKNNP HTAAIPIIDL GAIYTNDITL QANDEISKAC REWGFFQVVN HGMSPQLMER
101: AKEIWREFFH LPMELKNMHA NSPKTYEGYG SRLGVEKGAI LDWSDYYYLH YQPLSLKDYT KWPSLPLHCR ETLEGYCKEM VKLCENLMTI LSKKLGLQED
201: RLQNAFGGKD EAGGCLRVNY YPKCPQPELT LGLSPHSDPG GLTILLPDEH VAGLHVRGSD DAWITVEPAP HALIVNIGDQ IQMLSNSVYK SIEHRVIVSP
301: AEERLSLAFF YNPKGNVPIE PLKELVTVDS PALYTSTTYD QYRQFIRTQG PRNKSHIDEL RSPR
101: AKEIWREFFH LPMELKNMHA NSPKTYEGYG SRLGVEKGAI LDWSDYYYLH YQPLSLKDYT KWPSLPLHCR ETLEGYCKEM VKLCENLMTI LSKKLGLQED
201: RLQNAFGGKD EAGGCLRVNY YPKCPQPELT LGLSPHSDPG GLTILLPDEH VAGLHVRGSD DAWITVEPAP HALIVNIGDQ IQMLSNSVYK SIEHRVIVSP
301: AEERLSLAFF YNPKGNVPIE PLKELVTVDS PALYTSTTYD QYRQFIRTQG PRNKSHIDEL RSPR
001: MNIFQDWPEP IVRVQSLSES NLGAIPNRYV KPLSQRPNIT PHNKHNPQTT TIPIIDLGRL YTDDLTLQAK TLDEISKACR ELGFFQVVNH GMSPQLMDQA
101: KATWREFFNL PMELKNMHAN SPKTYEGYGS RLGVEKGAIL DWSDYYYLHY QPSSLKDYTK WPSLPLHCRE ILEDYCKEMV KLCENLMKIL SKNLGLQEDR
201: LQNAFGGKEE SGGCLRVNYY PKCPQPELTL GISPHSDPGG LTILLPDEQV ASLQVRGSDD AWITVEPAPH AFIVNMGDQI QMLSNSIYKS VEHRVIVNPE
301: NERLSLAFFY NPKGNVPIEP LKELVTVDSP ALYSSTTYDR YRQFIRTQGP RSKCHIDELK SPR
101: KATWREFFNL PMELKNMHAN SPKTYEGYGS RLGVEKGAIL DWSDYYYLHY QPSSLKDYTK WPSLPLHCRE ILEDYCKEMV KLCENLMKIL SKNLGLQEDR
201: LQNAFGGKEE SGGCLRVNYY PKCPQPELTL GISPHSDPGG LTILLPDEQV ASLQVRGSDD AWITVEPAPH AFIVNMGDQI QMLSNSIYKS VEHRVIVNPE
301: NERLSLAFFY NPKGNVPIEP LKELVTVDSP ALYSSTTYDR YRQFIRTQGP RSKCHIDELK SPR
Arabidopsis Description
JRG21JRG21 [Source:UniProtKB/TrEMBL;Acc:A0A178V764]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.