Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G109200.1 | Wheat | cytosol | 98.64 | 98.64 |
| TraesCS4B01G195000.1 | Wheat | cytosol | 98.37 | 98.37 |
| HORVU4Hr1G056500.2 | Barley | cytosol, peroxisome, plastid | 94.29 | 93.53 |
| EER92419 | Sorghum | cytosol | 81.52 | 78.33 |
| Zm00001d028744_P001 | Maize | cytosol | 79.89 | 78.19 |
| Os03t0289800-01 | Rice | cytosol | 80.43 | 76.49 |
| Zm00001d047744_P001 | Maize | mitochondrion | 79.08 | 71.5 |
| TraesCS1D01G072700.1 | Wheat | cytoskeleton, cytosol, peroxisome | 64.13 | 65.92 |
| GSMUA_Achr6P15610_001 | Banana | cytosol | 60.87 | 63.64 |
| KRH38051 | Soybean | cytosol, peroxisome | 33.42 | 63.4 |
| GSMUA_Achr7P15540_001 | Banana | cytosol | 58.7 | 61.02 |
| PGSC0003DMT400049193 | Potato | cytosol, mitochondrion, peroxisome | 29.89 | 60.11 |
| Bra034168.1-P | Field mustard | cytosol | 45.92 | 58.48 |
| KRH14938 | Soybean | cytosol | 56.79 | 57.89 |
| KRG97722 | Soybean | cytosol | 56.25 | 57.34 |
| VIT_13s0067g01020.t01 | Wine grape | cytosol | 55.43 | 56.82 |
| TraesCS3D01G345600.1 | Wheat | cytosol | 57.61 | 56.08 |
| KRH31155 | Soybean | cytosol | 54.89 | 55.96 |
| Solyc10g076660.1.1 | Tomato | cytosol | 54.89 | 55.34 |
| PGSC0003DMT400031149 | Potato | cytosol | 53.53 | 55.34 |
| VIT_08s0105g00380.t01 | Wine grape | cytosol | 53.8 | 55.31 |
| KRH65721 | Soybean | cytosol | 55.98 | 55.23 |
| KRH73197 | Soybean | cytosol | 56.52 | 55.03 |
| Solyc03g096050.2.1 | Tomato | cytosol | 53.26 | 54.9 |
| PGSC0003DMT400049192 | Potato | cytosol | 54.35 | 54.64 |
| AT2G38240.1 | Thale cress | plastid | 51.36 | 53.54 |
| KRH00254 | Soybean | plastid | 50.54 | 53.45 |
| Bra000045.1-P | Field mustard | plastid | 50.54 | 52.69 |
| CDY07746 | Canola | plastid | 50.54 | 52.69 |
| Bra005860.1-P | Field mustard | cytosol | 53.26 | 52.69 |
| CDY11329 | Canola | cytosol | 53.26 | 52.69 |
| KRH49391 | Soybean | cytosol | 54.62 | 52.62 |
| AT5G05600.1 | Thale cress | cytosol | 52.99 | 52.56 |
| CDY04960 | Canola | cytosol | 52.99 | 52.42 |
| Bra028752.1-P | Field mustard | cytosol | 52.99 | 52.42 |
| Bra017132.1-P | Field mustard | plastid | 50.27 | 52.26 |
| CDY18399 | Canola | plastid | 50.27 | 52.26 |
| CDX80966 | Canola | cytosol | 52.72 | 52.15 |
| CDX93319 | Canola | plastid | 50.0 | 52.12 |
| CDY68873 | Canola | plastid | 50.0 | 52.12 |
| CDY14476 | Canola | plastid | 50.0 | 52.12 |
| AT3G55970.1 | Thale cress | cytosol | 51.36 | 52.07 |
| CDY02966 | Canola | cytosol | 51.09 | 51.65 |
| TraesCS5D01G159800.1 | Wheat | plastid | 51.36 | 51.64 |
| Bra014716.1-P | Field mustard | cytosol | 51.09 | 51.37 |
| CDX76068 | Canola | cytosol | 50.82 | 51.09 |
| CDY14105 | Canola | cytosol, nucleus, peroxisome | 52.99 | 50.78 |
| Solyc10g076670.1.1 | Tomato | cytosol | 30.71 | 50.67 |
| PGSC0003DMT400028828 | Potato | cytosol | 48.37 | 49.44 |
| Solyc10g085190.1.1 | Tomato | cytosol | 48.1 | 49.03 |
| AT3G11180.2 | Thale cress | cytosol | 52.17 | 47.64 |
| CDY08545 | Canola | cytosol | 50.0 | 45.43 |
| Bra034861.1-P | Field mustard | cytosol | 50.0 | 45.43 |
| CDY01001 | Canola | cytosol | 49.46 | 44.94 |
| TraesCS4D01G339800.1 | Wheat | cytosol, plastid | 36.14 | 39.58 |
| TraesCS6D01G310700.1 | Wheat | plastid | 35.05 | 38.62 |
| TraesCS2D01G392800.1 | Wheat | cytosol | 35.33 | 38.24 |
| TraesCS7D01G119600.1 | Wheat | plastid | 33.7 | 36.05 |
| CDX72185 | Canola | nucleus | 49.18 | 35.91 |
| TraesCS4D01G341800.1 | Wheat | cytosol | 32.61 | 35.71 |
| TraesCS7D01G160100.2 | Wheat | plastid | 30.16 | 33.33 |
| TraesCS6D01G270600.1 | Wheat | plastid | 30.43 | 32.94 |
| TraesCS6D01G270700.1 | Wheat | cytosol, peroxisome, plastid | 30.16 | 32.65 |
| TraesCS6D01G270500.1 | Wheat | plastid | 29.89 | 32.07 |
| TraesCS7D01G279500.1 | Wheat | cytosol | 33.15 | 31.94 |
| TraesCS6D01G038900.1 | Wheat | cytosol | 26.9 | 30.84 |
| TraesCS3D01G437500.2 | Wheat | cytosol | 29.08 | 30.75 |
| TraesCS2D01G392900.1 | Wheat | plastid | 32.34 | 30.51 |
| TraesCS4D01G002800.1 | Wheat | cytosol, plastid | 31.79 | 29.92 |
| TraesCS6D01G035200.1 | Wheat | cytosol | 28.26 | 29.89 |
| TraesCS6D01G038500.1 | Wheat | plastid | 27.72 | 29.48 |
| Bra007204.1-P | Field mustard | cytosol | 49.46 | 29.31 |
| TraesCS2D01G493400.1 | Wheat | golgi, nucleus | 29.89 | 29.1 |
| CDY27251 | Canola | nucleus | 48.91 | 28.99 |
| TraesCS2D01G487400.1 | Wheat | cytosol, nucleus, peroxisome | 14.67 | 28.88 |
| TraesCS3D01G405500.1 | Wheat | cytosol | 27.17 | 28.65 |
| TraesCS3D01G411700.1 | Wheat | cytosol | 23.1 | 28.15 |
| TraesCS6D01G004300.1 | Wheat | cytosol | 32.61 | 27.4 |
| TraesCS2D01G539400.1 | Wheat | cytosol, nucleus, peroxisome | 23.91 | 26.83 |
| TraesCS2D01G539600.1 | Wheat | mitochondrion, plastid | 24.73 | 26.76 |
| TraesCS5D01G058700.2 | Wheat | cytosol | 25.82 | 25.2 |
| TraesCS3D01G316200.1 | Wheat | cytosol | 23.64 | 21.59 |
| TraesCS6D01G000600.1 | Wheat | mitochondrion | 14.95 | 21.57 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G195700.1 | EnsemblPlantsGene:TraesCS4D01G195700 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF92 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | PRINTS:PR00682 | SEG:seg | SUPFAM:SSF51197 | MapMan:50.1.13 | : |
Description
No Description!
Coordinates
chr4D:+:339539439..339542896
Molecular Weight (calculated)
40158.6 Da
IEP (calculated)
6.787
GRAVY (calculated)
-0.328
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSCFNGGAG WPEPVVRVQA VSDTCGETIP ERYVKLPLDR PSATTLQPAV SHGGGSLNIP VVDMSMPDSD ETVRAVDAAC REWGFFQAVN HGVGPELLRR
101: ARSSWRGFFR QPAEVRERYA NSPATYEGYG SRLGTTKGGH LDWGDYYFLH LLPPSIKSHD KWPSLPSTLR DATEEYGEQV VKLCRRVSKV LSKGLGLDGG
201: RLQAAFGGEG GEGACMRVNF YPRCPQPELT LGVAAHSDPG GMTMLLVDDH VRGLQVKKDG QWITVDPVPD AFIVNVGDQI QVLSNAAYKS VEHRVTVSAA
301: EERLSLAFFY NPRSDVPVAP MAELVAPGRP VLYPEMTFDE YRAHIRQRGL SGKAQLQSLQ NANSSVAS
101: ARSSWRGFFR QPAEVRERYA NSPATYEGYG SRLGTTKGGH LDWGDYYFLH LLPPSIKSHD KWPSLPSTLR DATEEYGEQV VKLCRRVSKV LSKGLGLDGG
201: RLQAAFGGEG GEGACMRVNF YPRCPQPELT LGVAAHSDPG GMTMLLVDDH VRGLQVKKDG QWITVDPVPD AFIVNVGDQI QVLSNAAYKS VEHRVTVSAA
301: EERLSLAFFY NPRSDVPVAP MAELVAPGRP VLYPEMTFDE YRAHIRQRGL SGKAQLQSLQ NANSSVAS
001: MATCWPEPIV SVQSLSQTGV PTVPNRYVKP AHQRPVFNTT QSDAGIEIPV LDMNDVWGKP EGLRLVRSAC EEWGFFQMVN HGVTHSLMER VRGAWREFFE
101: LPLEEKRKYA NSPDTYEGYG SRLGVVKDAK LDWSDYFFLN YLPSSIRNPS KWPSQPPKIR ELIEKYGEEV RKLCERLTET LSESLGLKPN KLMQALGGGD
201: KVGASLRTNF YPKCPQPQLT LGLSSHSDPG GITILLPDEK VAGLQVRRGD GWVTIKSVPN ALIVNIGDQL QILSNGIYKS VEHQVIVNSG MERVSLAFFY
301: NPRSDIPVGP IEELVTANRP ALYKPIRFDE YRSLIRQKGP CGKNQVDSLL LTR
101: LPLEEKRKYA NSPDTYEGYG SRLGVVKDAK LDWSDYFFLN YLPSSIRNPS KWPSQPPKIR ELIEKYGEEV RKLCERLTET LSESLGLKPN KLMQALGGGD
201: KVGASLRTNF YPKCPQPQLT LGLSSHSDPG GITILLPDEK VAGLQVRRGD GWVTIKSVPN ALIVNIGDQL QILSNGIYKS VEHQVIVNSG MERVSLAFFY
301: NPRSDIPVGP IEELVTANRP ALYKPIRFDE YRSLIRQKGP CGKNQVDSLL LTR
Arabidopsis Description
ANSProbable 2-oxoglutarate-dependent dioxygenase ANS [Source:UniProtKB/Swiss-Prot;Acc:O80449]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.