Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G568900.1 | Wheat | mitochondrion, plastid | 92.35 | 93.45 |
| TraesCS2A01G538700.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 88.82 | 92.64 |
| HORVU2Hr1G117900.3 | Barley | cytosol, mitochondrion, peroxisome | 85.0 | 90.88 |
| KXG27374 | Sorghum | plastid | 70.0 | 71.47 |
| Os04t0667400-01 | Rice | plastid | 65.59 | 66.97 |
| Zm00001d001924_P001 | Maize | plastid | 68.53 | 64.36 |
| TraesCS2D01G539400.1 | Wheat | cytosol, nucleus, peroxisome | 49.71 | 51.52 |
| VIT_16s0013g00730.t01 | Wine grape | cytosol | 28.82 | 49.0 |
| TraesCS2D01G487400.1 | Wheat | cytosol, nucleus, peroxisome | 26.76 | 48.66 |
| VIT_16s0013g00740.t01 | Wine grape | cytosol, nucleus, peroxisome, plastid | 45.59 | 43.66 |
| AT5G07480.1 | Thale cress | cytosol | 41.18 | 39.33 |
| CDY65238 | Canola | cytosol, nucleus, peroxisome | 41.47 | 39.06 |
| CDX70044 | Canola | cytosol, nucleus, peroxisome | 41.18 | 38.78 |
| Bra028696.1-P | Field mustard | cytosol | 40.59 | 38.23 |
| Bra009258.1-P | Field mustard | cytosol, nucleus, peroxisome | 27.94 | 34.42 |
| TraesCS7D01G279500.1 | Wheat | cytosol | 34.71 | 30.89 |
| TraesCS4D01G002800.1 | Wheat | cytosol, plastid | 35.29 | 30.69 |
| TraesCS6D01G038900.1 | Wheat | cytosol | 28.82 | 30.53 |
| TraesCS4D01G341800.1 | Wheat | cytosol | 29.71 | 30.06 |
| TraesCS7D01G160100.2 | Wheat | plastid | 29.41 | 30.03 |
| TraesCS2D01G392800.1 | Wheat | cytosol | 28.82 | 28.82 |
| TraesCS3D01G405500.1 | Wheat | cytosol | 29.41 | 28.65 |
| TraesCS6D01G038500.1 | Wheat | plastid | 29.12 | 28.61 |
| TraesCS7D01G119600.1 | Wheat | plastid | 28.82 | 28.49 |
| TraesCS6D01G270500.1 | Wheat | plastid | 28.24 | 27.99 |
| TraesCS6D01G270600.1 | Wheat | plastid | 27.94 | 27.94 |
| TraesCS3D01G437500.2 | Wheat | cytosol | 28.24 | 27.59 |
| TraesCS6D01G035200.1 | Wheat | cytosol | 28.24 | 27.59 |
| TraesCS2D01G392900.1 | Wheat | plastid | 31.47 | 27.44 |
| TraesCS6D01G270700.1 | Wheat | cytosol, peroxisome, plastid | 27.35 | 27.35 |
| TraesCS3D01G411700.1 | Wheat | cytosol | 23.24 | 26.16 |
| TraesCS5D01G058700.2 | Wheat | cytosol | 28.82 | 25.99 |
| TraesCS1D01G072700.1 | Wheat | cytoskeleton, cytosol, peroxisome | 26.76 | 25.42 |
| TraesCS6D01G310700.1 | Wheat | plastid | 24.71 | 25.15 |
| TraesCS5D01G159800.1 | Wheat | plastid | 27.06 | 25.14 |
| TraesCS3D01G345600.1 | Wheat | cytosol | 27.94 | 25.13 |
| TraesCS4D01G195700.1 | Wheat | cytosol | 26.76 | 24.73 |
| TraesCS4D01G339800.1 | Wheat | cytosol, plastid | 24.41 | 24.7 |
| TraesCS2D01G493400.1 | Wheat | golgi, nucleus | 27.06 | 24.34 |
| TraesCS3D01G316200.1 | Wheat | cytosol | 25.59 | 21.59 |
| TraesCS6D01G000600.1 | Wheat | mitochondrion | 15.29 | 20.39 |
| TraesCS6D01G004300.1 | Wheat | cytosol | 22.65 | 17.58 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G539600.1 | EnsemblPlantsGene:TraesCS2D01G539600 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF372 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | SUPFAM:SSF51197 | MapMan:50.1.13 | : | : | : |
Description
No Description!
Coordinates
chr2D:-:619869353..619870719
Molecular Weight (calculated)
36892.2 Da
IEP (calculated)
7.481
GRAVY (calculated)
-0.195
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MPAAVSGCLL ARSMASHHKH QQRGAAATAP GALPVINIGR LGDKDPAARA LVVQDIARAC RDRGCFQVVN HGVSKSAMDG ALEAASEFFD MPAERKAAFA
101: CADIRSPVRY DTSSKDGISK ARSFLKHYAN PLDHWVDSWP TQPATYRKKM GTYAVEIHKL SMQLTGAIVQ GLGLCPMHLQ EKLGAGMQFM GLNNYPQGSS
201: RAGDTVGLAP HSDIGFITIL LQSSPGLEVT HHDDGGVWTP VPAIPGALHV DLGDHLEVLS NGRLRSLLHR AILNTDEARI SIASIHGAAM DEKVGCAEEL
301: VDERHPRMYR ESSFHDFLDF LPTNVKAYRR FVETLKIDSA
101: CADIRSPVRY DTSSKDGISK ARSFLKHYAN PLDHWVDSWP TQPATYRKKM GTYAVEIHKL SMQLTGAIVQ GLGLCPMHLQ EKLGAGMQFM GLNNYPQGSS
201: RAGDTVGLAP HSDIGFITIL LQSSPGLEVT HHDDGGVWTP VPAIPGALHV DLGDHLEVLS NGRLRSLLHR AILNTDEARI SIASIHGAAM DEKVGCAEEL
301: VDERHPRMYR ESSFHDFLDF LPTNVKAYRR FVETLKIDSA
001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.