Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70044 | Canola | cytosol, nucleus, peroxisome | 97.23 | 97.23 |
| Bra028696.1-P | Field mustard | cytosol | 91.14 | 91.14 |
| AT5G07480.1 | Thale cress | cytosol | 85.6 | 86.8 |
| VIT_16s0013g00730.t01 | Wine grape | cytosol | 34.9 | 63.0 |
| VIT_16s0013g00740.t01 | Wine grape | cytosol, nucleus, peroxisome, plastid | 57.06 | 58.03 |
| TraesCS2A01G487100.1 | Wheat | cytosol | 36.57 | 47.83 |
| CDY56988 | Canola | peroxisome | 46.81 | 47.34 |
| HORVU2Hr1G108680.1 | Barley | cytosol | 26.32 | 47.26 |
| HORVU2Hr1G108800.1 | Barley | cytosol | 26.32 | 47.26 |
| TraesCS2D01G487400.1 | Wheat | cytosol, nucleus, peroxisome | 24.1 | 46.52 |
| CDY42687 | Canola | peroxisome | 45.71 | 46.09 |
| CDY30486 | Canola | cytosol, nucleus, peroxisome | 44.88 | 45.51 |
| CDX74687 | Canola | cytosol | 44.88 | 45.13 |
| HORVU2Hr1G117900.3 | Barley | cytosol, mitochondrion, peroxisome | 39.61 | 44.97 |
| CDY23457 | Canola | cytosol, nucleus, peroxisome | 44.32 | 44.94 |
| OQU82532 | Sorghum | cytosol | 39.34 | 44.24 |
| TraesCS2B01G568800.1 | Wheat | cytosol, nucleus, peroxisome | 40.17 | 44.21 |
| TraesCS2A01G538700.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 39.89 | 44.17 |
| HORVU2Hr1G117810.43 | Barley | cytosol, nucleus, peroxisome | 39.61 | 44.0 |
| TraesCS2A01G538600.1 | Wheat | cytosol | 39.89 | 43.9 |
| TraesCS2D01G539400.1 | Wheat | cytosol, nucleus, peroxisome | 39.89 | 43.9 |
| Os04t0667200-01 | Rice | cytosol | 39.34 | 43.56 |
| TraesCS2B01G514200.1 | Wheat | cytosol, nucleus, peroxisome | 39.34 | 43.43 |
| Zm00001d001927_P001 | Maize | cytosol | 39.06 | 43.12 |
| KXG27374 | Sorghum | plastid | 39.61 | 42.94 |
| Os04t0667400-01 | Rice | plastid | 39.06 | 42.34 |
| TraesCS2B01G568900.1 | Wheat | mitochondrion, plastid | 38.78 | 41.67 |
| TraesCS2D01G539600.1 | Wheat | mitochondrion, plastid | 39.06 | 41.47 |
| Zm00001d001924_P001 | Maize | plastid | 38.23 | 38.12 |
| CDX75020 | Canola | cytosol | 34.63 | 33.97 |
| CDY05412 | Canola | mitochondrion | 31.86 | 33.72 |
| CDY05445 | Canola | plastid | 31.86 | 33.72 |
| CDX86858 | Canola | cytosol | 31.3 | 33.33 |
| CDX90761 | Canola | plastid | 31.86 | 32.86 |
| CDX99548 | Canola | cytosol | 30.47 | 32.45 |
| CDX80450 | Canola | mitochondrion | 30.47 | 32.26 |
| CDY05103 | Canola | cytosol, nucleus, peroxisome | 31.3 | 32.19 |
| CDX88109 | Canola | mitochondrion | 30.19 | 31.96 |
| CDX99550 | Canola | cytosol | 29.64 | 31.38 |
| CDX99549 | Canola | vacuole | 18.28 | 30.99 |
| CDY69013 | Canola | cytosol | 25.21 | 29.64 |
| CDY41522 | Canola | cytosol | 24.38 | 29.63 |
| CDX90759 | Canola | cytosol | 24.65 | 29.47 |
| CDY04960 | Canola | cytosol | 29.92 | 29.03 |
| CDY21556 | Canola | cytoskeleton, cytosol, peroxisome | 26.87 | 28.87 |
| CDY39565 | Canola | cytosol | 24.38 | 28.85 |
| CDY39860 | Canola | cytosol | 24.65 | 28.8 |
| CDX69931 | Canola | cytoskeleton, cytosol, peroxisome | 26.59 | 28.57 |
| CDY48154 | Canola | cytosol | 24.1 | 28.52 |
| CDY07746 | Canola | plastid | 27.7 | 28.33 |
| CDY18399 | Canola | plastid | 27.7 | 28.25 |
| CDY32234 | Canola | cytosol, nucleus, peroxisome | 26.59 | 28.07 |
| CDY34450 | Canola | cytosol | 26.59 | 28.07 |
| CDY14476 | Canola | plastid | 27.42 | 28.05 |
| CDY11329 | Canola | cytosol | 28.81 | 27.96 |
| CDY41520 | Canola | cytosol | 19.11 | 27.94 |
| CDX93319 | Canola | plastid | 27.15 | 27.76 |
| CDY68873 | Canola | plastid | 27.15 | 27.76 |
| CDX80966 | Canola | cytosol | 28.53 | 27.69 |
| CDY31361 | Canola | cytosol | 23.55 | 27.42 |
| CDY14105 | Canola | cytosol, nucleus, peroxisome | 29.09 | 27.34 |
| CDY02966 | Canola | cytosol | 27.42 | 27.2 |
| CDX81188 | Canola | cytosol | 24.1 | 27.19 |
| CDX76068 | Canola | cytosol | 27.42 | 27.05 |
| CDY01001 | Canola | cytosol | 28.25 | 25.19 |
| CDY41286 | Canola | cytosol | 24.93 | 25.14 |
| CDX94133 | Canola | cytosol | 24.93 | 25.14 |
| CDX97750 | Canola | cytosol | 15.24 | 24.89 |
| CDY10816 | Canola | cytosol | 24.65 | 24.86 |
| CDY08545 | Canola | cytosol | 27.42 | 24.44 |
| CDX98776 | Canola | cytosol | 25.21 | 23.16 |
| CDX77983 | Canola | cytosol | 22.44 | 22.63 |
| CDX90656 | Canola | cytosol | 21.88 | 22.57 |
| CDX73739 | Canola | cytosol | 22.16 | 22.35 |
| CDY29008 | Canola | cytosol | 21.61 | 22.29 |
| CDX76765 | Canola | cytosol | 14.13 | 21.43 |
| CDY31363 | Canola | cytosol | 24.93 | 21.33 |
| CDX76159 | Canola | cytoskeleton, cytosol, peroxisome | 16.62 | 20.48 |
| CDX72185 | Canola | nucleus | 27.42 | 19.64 |
| CDY27251 | Canola | nucleus | 26.59 | 15.46 |
| CDY41521 | Canola | cytosol, mitochondrion | 0.55 | 9.52 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | GO:A0A078JC86 | UniProt:A0A078JC86 | EnsemblPlants:CDY65238 | ProteinID:CDY65238 |
| ProteinID:CDY65238.1 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00045448001 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 |
| PANTHER:PTHR10209 | PANTHER:PTHR10209:SF201 | SUPFAM:SSF51197 | UniParc:UPI0004EE45AE | : | : |
Description
BnaC09g47910DBnaC09g47910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JC86]
Coordinates
chrLK034703:+:16810..19832
Molecular Weight (calculated)
40909.9 Da
IEP (calculated)
6.322
GRAVY (calculated)
-0.344
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MENEKGESSS IFKMGNSAQE RSLPYVPDCY AVPPSYEPRD ALDSNFEIVP TIDISRLKGS DDERRGVIQE LSSACQLFGF FQIVNHGINQ NILDDALEVA
101: HGFFELPAKE KKKFMSNDVY APVRYTTSIK DGLDKIQFWR IFLKHYAHPL HRWIHLWPQN PPEYREKMGK FCEEVRSLSL EIMGAITESL GLGRDYLSSR
201: MDKNGMQVMA VNCYPPCPDP TTALGLPPHS DYSCITILLQ NLTGLEIFHL SAHGGSGRWV LVPEVKGVLK VHIGDHVEVL SNGLYKSVIH KATLNEEKTR
301: ISLASLHSLG MDDKMSVPYQ LVNNENPARY RESSFNDFLA FLVKNDISQG ERFIDTLRIK D
101: HGFFELPAKE KKKFMSNDVY APVRYTTSIK DGLDKIQFWR IFLKHYAHPL HRWIHLWPQN PPEYREKMGK FCEEVRSLSL EIMGAITESL GLGRDYLSSR
201: MDKNGMQVMA VNCYPPCPDP TTALGLPPHS DYSCITILLQ NLTGLEIFHL SAHGGSGRWV LVPEVKGVLK VHIGDHVEVL SNGLYKSVIH KATLNEEKTR
301: ISLASLHSLG MDDKMSVPYQ LVNNENPARY RESSFNDFLA FLVKNDISQG ERFIDTLRIK D
001: MEKGEDSSTF KMGNSAQERS LPYVPDCYVV PPSSKPCDSN SGIVPTIDVS RLKGGDDERR GVIQELSLAC QHLGFFQIVN HGINQNILDD ALEVANSFFE
101: LPAKEKKQFM SNDVYAPVRY STSLKDGLDT IQFWRIFLKH YAHPLHRWIH LWPENPPGYR EKMGKFCEEV RKLSIELMGA ITESLGLGRD YLSSRMDENG
201: MQVMTVNCYP PCPDPETALG LPPHSDYSCI TLLLQNLDGL KIFDPMAHGG SGRWVGVPQV TGVLKVHIGD HVEVLSNGLY KSIVHKVTLN EEKTRISLAS
301: LHSLGMDDKM SVPRELVNDE NPVRYKESSF NDFLDFLVKN DISQGDRFID TLRIKD
101: LPAKEKKQFM SNDVYAPVRY STSLKDGLDT IQFWRIFLKH YAHPLHRWIH LWPENPPGYR EKMGKFCEEV RKLSIELMGA ITESLGLGRD YLSSRMDENG
201: MQVMTVNCYP PCPDPETALG LPPHSDYSCI TLLLQNLDGL KIFDPMAHGG SGRWVGVPQV TGVLKVHIGD HVEVLSNGLY KSIVHKVTLN EEKTRISLAS
301: LHSLGMDDKM SVPRELVNDE NPVRYKESSF NDFLDFLVKN DISQGDRFID TLRIKD
Arabidopsis Description
KUOX1KAR-UP oxidoreductase 1 [Source:TAIR;Acc:AT5G07480]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.