CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017132.1-P	Field mustard	plastid	100.0	100.0
CDY68873	Canola	plastid	96.61	96.88
CDX93319	Canola	plastid	96.61	96.88
CDY07746	Canola	plastid	92.37	92.63
CDY14476	Canola	plastid	92.09	92.35
AT2G38240.1	Thale cress	plastid	83.62	83.85
KRH38051	Soybean	cytosol, peroxisome	36.72	67.01
PGSC0003DMT400049193	Potato	cytosol, mitochondrion, peroxisome	32.49	62.84
KRH00254	Soybean	plastid	57.34	58.33
KRH65721	Soybean	cytosol	60.73	57.64
PGSC0003DMT400049192	Potato	cytosol	59.32	57.38
Solyc10g076660.1.1	Tomato	cytosol	58.76	56.99
VIT_08s0105g00380.t01	Wine grape	cytosol	57.63	56.98
KRH49391	Soybean	cytosol	61.02	56.54
GSMUA_Achr7P15540_001	Banana	cytosol	54.24	54.24
TraesCS1B01G088600.1	Wheat	cytoskeleton, cytosol, peroxisome	54.8	54.19
TraesCS1D01G072700.1	Wheat	cytoskeleton, cytosol, peroxisome	54.52	53.91
GSMUA_Achr6P15610_001	Banana	cytosol	53.39	53.69
TraesCS1A01G070200.1	Wheat	cytoskeleton, cytosol, peroxisome	54.24	53.63
PGSC0003DMT400028828	Potato	cytosol	54.52	53.61
HORVU1Hr1G015050.7	Barley	cytosol, peroxisome	54.52	53.17
CDY11329	Canola	cytosol	55.65	52.96
CDY04960	Canola	cytosol	55.65	52.96
CDX80966	Canola	cytosol	55.37	52.69
Solyc10g085190.1.1	Tomato	cytosol	53.67	52.63
EES18946	Sorghum	cytosol	54.24	52.46
CDY02966	Canola	cytosol	53.39	51.92
CDX76068	Canola	cytosol	53.11	51.37
CDY14105	Canola	cytosol, nucleus, peroxisome	55.65	51.3
Os01t0832600-01	Rice	cytosol	52.82	51.09
Os05t0127500-01	Rice	cytosol	53.11	51.09
TraesCS4B01G195000.1	Wheat	cytosol	53.11	51.09
HORVU4Hr1G056500.2	Barley	cytosol, peroxisome, plastid	53.39	50.94
TraesCS4A01G109200.1	Wheat	cytosol	52.82	50.82
TraesCS3B01G383900.1	Wheat	cytosol	53.11	50.4
TraesCS4D01G195700.1	Wheat	cytosol	52.26	50.27
EES01705	Sorghum	cytosol	54.8	50.0
Zm00001d028744_P001	Maize	cytosol	53.11	50.0
Solyc10g076670.1.1	Tomato	cytosol	31.36	49.78
Zm00001d035462_P001	Maize	cytosol	53.39	49.48
Zm00001d042980_P002	Maize	cytosol	52.26	49.47
TraesCS3A01G351400.2	Wheat	cytosol	52.82	49.34
TraesCS3D01G345600.1	Wheat	cytosol	52.54	49.21
EER92419	Sorghum	cytosol	52.26	48.3
CDY01001	Canola	cytosol	54.8	47.9
CDY08545	Canola	cytosol	54.24	47.41
Os03t0289800-01	Rice	cytosol	51.69	47.29
TraesCS4B01G328300.1	Wheat	cytosol	35.59	47.01
Zm00001d047744_P001	Maize	mitochondrion	53.95	46.93
HORVU3Hr1G087570.4	Barley	cytosol, peroxisome, plastid	52.82	45.72
Zm00001d012456_P004	Maize	plastid	53.67	40.25
CDY34450	Canola	cytosol	36.44	37.72
CDY32234	Canola	cytosol, nucleus, peroxisome	36.16	37.43
CDX72185	Canola	nucleus	52.82	37.1
CDX69931	Canola	cytoskeleton, cytosol, peroxisome	35.03	36.9
CDY21556	Canola	cytoskeleton, cytosol, peroxisome	35.03	36.9
CDX99549	Canola	vacuole	21.75	36.15
CDY48154	Canola	cytosol	30.51	35.41
CDY69013	Canola	cytosol	30.51	35.18
CDY39565	Canola	cytosol	30.23	35.08
CDX90761	Canola	plastid	34.18	34.57
CDX86858	Canola	cytosol	33.05	34.51
CDY41520	Canola	cytosol	24.01	34.41
CDX99548	Canola	cytosol	32.49	33.92
CDY39860	Canola	cytosol	29.38	33.66
CDY31361	Canola	cytosol	29.38	33.55
CDX74687	Canola	cytosol	33.9	33.43
CDY05103	Canola	cytosol, nucleus, peroxisome	33.05	33.33
CDX90656	Canola	cytosol	32.77	33.14
CDY05412	Canola	mitochondrion	31.92	33.14
CDX88109	Canola	mitochondrion	31.92	33.14
CDY23457	Canola	cytosol, nucleus, peroxisome	33.05	32.87
CDX80450	Canola	mitochondrion	31.64	32.84
CDY29008	Canola	cytosol	32.2	32.57
CDY05445	Canola	plastid	31.36	32.55
CDX73739	Canola	cytosol	32.77	32.4
CDX77983	Canola	cytosol	32.77	32.4
CDX94133	Canola	cytosol	32.77	32.4
CDY30486	Canola	cytosol, nucleus, peroxisome	32.49	32.3
CDX99550	Canola	cytosol	31.07	32.26
CDY41286	Canola	cytosol	32.49	32.12
CDY10816	Canola	cytosol	32.49	32.12
CDY56988	Canola	peroxisome	32.2	31.93
CDY42687	Canola	peroxisome	32.2	31.84
CDX90759	Canola	cytosol	26.84	31.46
CDY41522	Canola	cytosol	26.27	31.31
CDX97750	Canola	cytosol	19.21	30.77
CDX75020	Canola	cytosol	31.92	30.71
CDX81188	Canola	cytosol	27.68	30.62
CDX98776	Canola	cytosol	33.05	29.77
CDY27251	Canola	nucleus	51.98	29.63
CDX76159	Canola	cytoskeleton, cytosol, peroxisome	23.16	27.99
CDX70044	Canola	cytosol, nucleus, peroxisome	28.53	27.98
CDY65238	Canola	cytosol, nucleus, peroxisome	28.25	27.7
CDX76765	Canola	cytosol	18.36	27.31
CDY31363	Canola	cytosol	29.66	24.88
CDY41521	Canola	cytosol, mitochondrion	0.85	14.29

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	GO:A0A078FYX7	UniProt:A0A078FYX7	EnsemblPlants:CDY18399	ProteinID:CDY18399
ProteinID:CDY18399.1	ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00005388001
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF134	SUPFAM:SSF51197	UniParc:UPI0002544808	:

Description

BnaA04g21880DBnaA04g21880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYX7]

Coordinates

chrLK032085:+:228845..230845

Molecular Weight (calculated)

39832.7 Da

IEP (calculated)

6.634

GRAVY (calculated)

-0.349

Length

354 amino acids

Sequence
(BLAST)

001: MVASWPEPIV SVQALSQAGI STVPSRYVKP AHQRPVVYNS DQSGLDMEVP VLDMSDIWRK PEGLRRVRNA CEEWGFFQVV NHGVDHMLME SVRGAWREFF
101: DLPVEVKRKY ANSPDTYEGY GSRIGVVKDA KLDWSDYFFL NYLPSSIRNP SKWPSQPPKI RELIEEYGEE VRKLCERLVE TLSESLGLEP NHLMKAFGGE
201: DKVGANLRAN FYPKCPQPHL TLGLSSHSDP GGITIVLPDE KVAGLQVRRG DCWVTIKSVP NALIVNIGDQ VQILSNGIYK SVEHQVVVNS GMDRVSLALF
301: YNPRSDIPIG PVKELLTEDQ PALYKPIRFD EYRLLIRQKG PSGKNQVDSL LAST

Best Arabidopsis Sequence Match ( AT2G38240.1 )
(BLAST)

001: MATCWPEPIV SVQSLSQTGV PTVPNRYVKP AHQRPVFNTT QSDAGIEIPV LDMNDVWGKP EGLRLVRSAC EEWGFFQMVN HGVTHSLMER VRGAWREFFE
101: LPLEEKRKYA NSPDTYEGYG SRLGVVKDAK LDWSDYFFLN YLPSSIRNPS KWPSQPPKIR ELIEKYGEEV RKLCERLTET LSESLGLKPN KLMQALGGGD
201: KVGASLRTNF YPKCPQPQLT LGLSSHSDPG GITILLPDEK VAGLQVRRGD GWVTIKSVPN ALIVNIGDQL QILSNGIYKS VEHQVIVNSG MERVSLAFFY
301: NPRSDIPVGP IEELVTANRP ALYKPIRFDE YRSLIRQKGP CGKNQVDSLL LTR

Arabidopsis Description

ANSProbable 2-oxoglutarate-dependent dioxygenase ANS [Source:UniProtKB/Swiss-Prot;Acc:O80449]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.