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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • nucleus 1
  • vacuole 3
  • extracellular 2
  • endoplasmic reticulum 2
  • plasma membrane 2
  • golgi 2
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:vacuole
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX99550 Canola cytosol 92.02 57.48
CDX99548 Canola cytosol 91.08 57.23
CDX86858 Canola cytosol 90.14 56.64
Bra037921.1-P Field mustard cytosol 90.14 54.7
CDY05103 Canola cytosol, nucleus, peroxisome 86.85 52.71
AT4G10490.1 Thale cress cytosol 77.93 47.7
CDX90759 Canola cytosol 64.32 45.36
CDX90761 Canola plastid 68.54 41.71
VIT_02s0025g02970.t01 Wine grape cytosol 65.26 39.94
VIT_02s0025g02960.t01 Wine grape cytosol 63.38 38.79
TraesCS2B01G412900.1 Wheat plastid 55.87 34.1
TraesCS2A01G394900.1 Wheat plastid 55.87 34.1
Zm00001d002564_P001 Maize cytosol, peroxisome, plastid 55.87 33.9
EES12710 Sorghum cytosol, peroxisome, plastid 55.4 33.62
GSMUA_AchrUn_... Banana mitochondrion, plastid 61.03 33.33
Os04t0581100-01 Rice cytosol, peroxisome, plastid 53.52 32.39
HORVU2Hr1G093950.12 Barley peroxisome, plastid 51.64 31.52
TraesCS2D01G392900.1 Wheat plastid 56.34 30.77
CDX88109 Canola mitochondrion 47.89 29.91
CDY05445 Canola plastid 47.89 29.91
CDY05412 Canola mitochondrion 47.89 29.91
CDX80450 Canola mitochondrion 46.95 29.33
CDX97750 Canola cytosol 29.58 28.51
CDX90656 Canola cytosol 38.97 23.71
CDX76765 Canola cytosol 26.29 23.53
CDX77983 Canola cytosol 39.44 23.46
CDY48154 Canola cytosol 33.33 23.28
CDY39565 Canola cytosol 33.33 23.28
CDY41522 Canola cytosol 32.39 23.23
CDX73739 Canola cytosol 38.97 23.18
CDY29008 Canola cytosol 38.03 23.14
CDX69931 Canola cytoskeleton, cytosol, peroxisome 35.68 22.62
CDY21556 Canola cytoskeleton, cytosol, peroxisome 35.68 22.62
CDY18399 Canola plastid 36.15 21.75
CDY32234 Canola cytosol, nucleus, peroxisome 34.74 21.64
CDY34450 Canola cytosol 34.74 21.64
CDY68873 Canola plastid 35.68 21.53
CDX93319 Canola plastid 35.68 21.53
CDY07746 Canola plastid 35.68 21.53
CDY69013 Canola cytosol 30.99 21.5
CDY39860 Canola cytosol 30.99 21.36
CDY31361 Canola cytosol 30.52 20.97
CDY14476 Canola plastid 34.74 20.96
CDY02966 Canola cytosol 34.74 20.33
CDX76068 Canola cytosol 34.74 20.22
CDX76159 Canola cytoskeleton, cytosol, peroxisome 27.7 20.14
CDY04960 Canola cytosol 34.74 19.89
CDY11329 Canola cytosol 34.74 19.89
CDY30486 Canola cytosol, nucleus, peroxisome 32.86 19.66
CDX80966 Canola cytosol 34.27 19.62
CDY56988 Canola peroxisome 32.86 19.61
CDX75020 Canola cytosol 33.8 19.57
CDY42687 Canola peroxisome 32.86 19.55
CDY23457 Canola cytosol, nucleus, peroxisome 32.39 19.38
CDY14105 Canola cytosol, nucleus, peroxisome 34.74 19.27
CDX81188 Canola cytosol 28.64 19.06
CDX74687 Canola cytosol 31.92 18.94
CDY65238 Canola cytosol, nucleus, peroxisome 30.99 18.28
CDY41520 Canola cytosol 21.13 18.22
CDY41286 Canola cytosol 30.52 18.16
CDY01001 Canola cytosol 34.27 18.02
CDX70044 Canola cytosol, nucleus, peroxisome 30.52 18.01
CDY10816 Canola cytosol 30.05 17.88
CDY08545 Canola cytosol 33.8 17.78
CDX94133 Canola cytosol 29.58 17.6
CDX98776 Canola cytosol 29.58 16.03
CDY31363 Canola cytosol 31.46 15.88
CDX72185 Canola nucleus 36.62 15.48
CDY27251 Canola nucleus 37.09 12.72
CDY41521 Canola cytosol, mitochondrion 0.94 9.52
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13GO:A0A078EFI7EnsemblPlants:CDX99549ProteinID:CDX99549ProteinID:CDX99549.1
GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00107990001InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171
PRINTS:PR00682PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF251SUPFAM:SSF51197UniParc:UPI0004EF0E9A
SEG:seg:::::
Description
BnaC09g24430D
Coordinates
chrLK031911:-:789040..789820
Molecular Weight (calculated)
23816.5 Da
IEP (calculated)
5.532
GRAVY (calculated)
-0.117
Length
213 amino acids
Sequence
(BLAST)
001: MLLSCIILGR HNIILTAHTV TAEYATSVRA LVLVLLEEIS ESLGLAKDSD CKASNTLGKH SQHMALNYYP PCPQPDLTFG LPGHKDPNLI TALLQDEVSG
101: LQVFKDGKWI AVHPVPNTFI VNMGDQMQVI SNDKYKSVLH RAVVNSDKER ISIPTFYCPS LDAVVGPQQE LINEEEESHA VYRSFTYAEY YEKFWDRALA
201: TESCIDLFKA SKT
Best Arabidopsis Sequence Match ( AT4G10490.1 )
(BLAST)
001: MAASKLLVSD IASVVDHVPS NYVRPVSDRP KMSEVQTSGD SIPLIDLHDL HGPNRADIIN QFAHACSSCG FFQIKNHGVP EETIKKMMNA AREFFRQSES
101: ERVKHYSADT KKTTRLSTSF NVSKEKVSNW RDFLRLHCYP IEDFINEWPS TPISFREVTA EYATSVRALV LTLLEAISES LGLAKDRVSN TIGKHGQHMA
201: INYYPRCPQP ELTYGLPGHK DANLITVLLQ DEVSGLQVFK DGKWIAVNPV PNTFIVNLGD QMQVISNEKY KSVLHRAVVN SDMERISIPT FYCPSEDAVI
301: SPAQELINEE EDSPAIYRNF TYAEYFEKFW DTAFDTESCI DSFKASTA
Arabidopsis Description
DLO2Protein DMR6-LIKE OXYGENASE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSA7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.