Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_10s0003g04670.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G10500.1 | VIT_10s0003g04670.t01 | AT2G34710.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0025g02960.t01 | Wine grape | cytosol | 90.8 | 90.8 |
| VIT_15s0048g02430.t01 | Wine grape | cytosol | 67.53 | 68.31 |
| CDX99549 | Canola | vacuole | 39.94 | 65.26 |
| Bra000712.1-P | Field mustard | cytosol, nucleus, peroxisome | 65.52 | 64.96 |
| AT4G10490.1 | Thale cress | cytosol | 64.94 | 64.94 |
| CDX86858 | Canola | cytosol | 63.22 | 64.9 |
| CDX99548 | Canola | cytosol | 63.22 | 64.9 |
| Bra037921.1-P | Field mustard | cytosol | 65.23 | 64.67 |
| CDY05103 | Canola | cytosol, nucleus, peroxisome | 65.23 | 64.67 |
| AT4G10500.1 | Thale cress | plastid | 64.37 | 64.18 |
| CDX99550 | Canola | cytosol | 62.36 | 63.64 |
| CDX90759 | Canola | cytosol | 53.74 | 61.92 |
| Bra000713.1-P | Field mustard | plastid | 61.49 | 61.14 |
| CDX90761 | Canola | plastid | 61.49 | 61.14 |
| Zm00001d002564_P001 | Maize | cytosol, peroxisome, plastid | 61.21 | 60.68 |
| EES12710 | Sorghum | cytosol, peroxisome, plastid | 60.63 | 60.11 |
| TraesCS2A01G394900.1 | Wheat | plastid | 59.77 | 59.6 |
| TraesCS2B01G412900.1 | Wheat | plastid | 59.2 | 59.03 |
| Os04t0581100-01 | Rice | cytosol, peroxisome, plastid | 59.2 | 58.52 |
| GSMUA_AchrUn_... | Banana | mitochondrion, plastid | 65.52 | 58.46 |
| HORVU2Hr1G093950.12 | Barley | peroxisome, plastid | 58.05 | 57.88 |
| VIT_13s0047g00210.t01 | Wine grape | cytosol | 52.01 | 53.71 |
| TraesCS2D01G392900.1 | Wheat | plastid | 60.06 | 53.59 |
| VIT_16s0098g00860.t01 | Wine grape | cytosol, peroxisome, plastid | 50.57 | 52.07 |
| VIT_16s0013g00730.t01 | Wine grape | cytosol | 22.99 | 40.0 |
| VIT_07s0005g03150.t01 | Wine grape | cytosol, peroxisome, plastid | 36.49 | 37.24 |
| VIT_08s0007g04540.t01 | Wine grape | cytosol | 38.79 | 35.81 |
| VIT_16s0013g00740.t01 | Wine grape | cytosol, nucleus, peroxisome, plastid | 36.49 | 35.77 |
| VIT_08s0105g00380.t01 | Wine grape | cytosol | 36.78 | 35.75 |
| VIT_18s0001g06690.t01 | Wine grape | cytosol | 34.48 | 35.71 |
| VIT_13s0067g01020.t01 | Wine grape | cytosol | 36.78 | 35.65 |
| VIT_03s0017g00620.t01 | Wine grape | cytosol | 35.92 | 35.51 |
| VIT_00s0250g00090.t01 | Wine grape | cytosol | 37.07 | 34.49 |
| VIT_18s0001g03430.t01 | Wine grape | cytosol | 32.76 | 34.34 |
| VIT_04s0023g03370.t01 | Wine grape | cytosol | 35.63 | 34.16 |
| VIT_03s0017g00710.t01 | Wine grape | plastid | 33.62 | 33.72 |
| VIT_03s0017g02350.t01 | Wine grape | cytosol | 34.2 | 33.52 |
| VIT_18s0001g14310.t01 | Wine grape | cytosol | 34.48 | 33.52 |
| VIT_18s0001g03470.t01 | Wine grape | cytosol | 30.75 | 33.23 |
| VIT_18s0001g03490.t01 | Wine grape | cytosol | 31.03 | 32.24 |
| VIT_02s0025g04720.t01 | Wine grape | cytosol, peroxisome, plastid | 29.6 | 29.01 |
| VIT_03s0017g00830.t01 | Wine grape | plastid | 35.63 | 22.88 |
| VIT_18s0001g03510.t01 | Wine grape | cytosol | 31.61 | 16.18 |
Protein Annotations
| EntrezGene:100251364 | wikigene:100251364 | MapMan:11.8.3.4 | Gene3D:2.60.120.330 | ProteinID:CCB58320 | ProteinID:CCB58320.1 |
| InterPro:DIOX_N | UniProt:F6HU97 | EMBL:FN596251 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | EntrezGene:LOC100251364 | wikigene:LOC100251364 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 |
| PFAM:PF14226 | PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF251 | SUPFAM:SSF51197 |
| UniParc:UPI00015CC81A | ArrayExpress:VIT_02s0025g02970 | EnsemblPlantsGene:VIT_02s0025g02970 | EnsemblPlants:VIT_02s0025g02970.t01 | RefSeq:XP_002278024 | RefSeq:XP_002278024.1 |
Description
No Description!
Coordinates
chr2:-:2531227..2532555
Molecular Weight (calculated)
39297.6 Da
IEP (calculated)
5.947
GRAVY (calculated)
-0.346
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPSTTKLLL TDMVLGVDHV PSNYVRPPSE RPNFKDVQAS DVSIPLIDLQ DLQGPGRPDV VKQIGQACQH SGFFQIQNHG VSETMISNIL RLARDFFQLP
101: ESERLKNYSD NPSNPVRLST SFNVKTEKVA NWRDFLRLHC YPLEDYVHQW PSNPPSFRED VAEYCTSIRA LVLRLLETIS ESLGLEKNYV SGVLGKHGQH
201: MAMNYYPPCP QPELTYGLPG HTDCSLITVL LQDDVPGLQV LRNGKWVSVN PIPNSFIVNI GDHMQVISND RYKSVLHRAV VNCNKDRISI PTFYCPSPDA
301: VIGPSPELVD DDHPAVYRNF TCEEYYTQFW NRGLATESCL DTFKASTT
101: ESERLKNYSD NPSNPVRLST SFNVKTEKVA NWRDFLRLHC YPLEDYVHQW PSNPPSFRED VAEYCTSIRA LVLRLLETIS ESLGLEKNYV SGVLGKHGQH
201: MAMNYYPPCP QPELTYGLPG HTDCSLITVL LQDDVPGLQV LRNGKWVSVN PIPNSFIVNI GDHMQVISND RYKSVLHRAV VNCNKDRISI PTFYCPSPDA
301: VIGPSPELVD DDHPAVYRNF TCEEYYTQFW NRGLATESCL DTFKASTT
001: MAASKLLVSD IASVVDHVPS NYVRPVSDRP KMSEVQTSGD SIPLIDLHDL HGPNRADIIN QFAHACSSCG FFQIKNHGVP EETIKKMMNA AREFFRQSES
101: ERVKHYSADT KKTTRLSTSF NVSKEKVSNW RDFLRLHCYP IEDFINEWPS TPISFREVTA EYATSVRALV LTLLEAISES LGLAKDRVSN TIGKHGQHMA
201: INYYPRCPQP ELTYGLPGHK DANLITVLLQ DEVSGLQVFK DGKWIAVNPV PNTFIVNLGD QMQVISNEKY KSVLHRAVVN SDMERISIPT FYCPSEDAVI
301: SPAQELINEE EDSPAIYRNF TYAEYFEKFW DTAFDTESCI DSFKASTA
101: ERVKHYSADT KKTTRLSTSF NVSKEKVSNW RDFLRLHCYP IEDFINEWPS TPISFREVTA EYATSVRALV LTLLEAISES LGLAKDRVSN TIGKHGQHMA
201: INYYPRCPQP ELTYGLPGHK DANLITVLLQ DEVSGLQVFK DGKWIAVNPV PNTFIVNLGD QMQVISNEKY KSVLHRAVVN SDMERISIPT FYCPSEDAVI
301: SPAQELINEE EDSPAIYRNF TYAEYFEKFW DTAFDTESCI DSFKASTA
Arabidopsis Description
DLO2Protein DMR6-LIKE OXYGENASE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSA7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.