Factsheet for VIT_03s0017g00710.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
peroxisome 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0017g00620.t01	Wine grape	cytosol	72.62	71.59
VIT_03s0017g00830.t01	Wine grape	plastid	98.56	63.1
PGSC0003DMT400083733	Potato	cytosol	54.76	52.78
VIT_18s0001g06690.t01	Wine grape	cytosol	51.01	52.68
Solyc08g006770.2.1	Tomato	plastid	53.03	52.42
PGSC0003DMT400067586	Potato	cytosol, peroxisome, plastid	53.03	52.12
Solyc01g105660.2.1	Tomato	cytosol, plastid	53.6	52.1
VIT_16s0013g00730.t01	Wine grape	cytosol	21.04	36.5
VIT_15s0048g02430.t01	Wine grape	cytosol	35.45	35.76
VIT_13s0047g00210.t01	Wine grape	cytosol	33.14	34.12
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	32.85	33.73
VIT_02s0025g02970.t01	Wine grape	cytosol	33.72	33.62
VIT_02s0025g02960.t01	Wine grape	cytosol	32.56	32.47
VIT_00s0250g00090.t01	Wine grape	cytosol	34.87	32.35
VIT_08s0007g04540.t01	Wine grape	cytosol	34.87	32.1
VIT_16s0013g00740.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	32.56	31.83
VIT_13s0067g01020.t01	Wine grape	cytosol	32.28	31.2
VIT_18s0001g03470.t01	Wine grape	cytosol	27.67	29.81
VIT_08s0105g00380.t01	Wine grape	cytosol	30.55	29.61
VIT_18s0001g03430.t01	Wine grape	cytosol	27.67	28.92
VIT_03s0017g02350.t01	Wine grape	cytosol	29.39	28.73
VIT_18s0001g03490.t01	Wine grape	cytosol	27.67	28.66
VIT_02s0025g04720.t01	Wine grape	cytosol, peroxisome, plastid	27.67	27.04
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	26.51	26.98
VIT_18s0001g14310.t01	Wine grape	cytosol	25.36	24.58
VIT_04s0023g03370.t01	Wine grape	cytosol	25.36	24.24
VIT_18s0001g03510.t01	Wine grape	cytosol	28.53	14.56

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	ProteinID:CCB57991	ProteinID:CCB57991.1	InterPro:DIOX_N	UniProt:F6HTI1
EMBL:FN596248	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF369
SUPFAM:SSF51197	UniParc:UPI0002108B91	ArrayExpress:VIT_03s0017g00710	EnsemblPlantsGene:VIT_03s0017g00710	EnsemblPlants:VIT_03s0017g00710.t01	RefSeq:XP_002265816
RefSeq:XP_002265816.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:15617726..15621946

Molecular Weight (calculated)

38883.8 Da

IEP (calculated)

6.507

GRAVY (calculated)

-0.185

Length

347 amino acids

Sequence
(BLAST)

001: MATATPNLLQ PPNFTCVKSL SESSALTSIP STYTFTTDPN QLLAFEPQHS IPIIDFSLLT SGDPDQRSRA IQDLDQACLE WGFFMLINHG VPESLMTGMI
101: EACRGFFDLT EEEKREFQGT HVLSPIRCGT SFNARVDQIL FWRDFLKVFV HPQFHSPSKP AGFSEVCLEY TQRMRKVAGE LLKGISKSLG LEEWYIDKTM
201: NMDSGLQILT VTIHPYAMGM PPHSDHSFLT ILIQNGIGGL QVQHKGQWFD VNPIPNSILV NTGDHLEVLS NGKYKSVLHR AVVNNKTTRI SLALSNGPSL
301: DTVVEPVPEL SHPLKYVGMA YKEYLELQQG NKLDGKTCLD RVRIRTM

Best Arabidopsis Sequence Match ( AT2G36690.1 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.