Factsheet for VIT_16s0098g00860.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0047g00210.t01	Wine grape	cytosol	76.63	76.85
AT5G24530.1	Thale cress	mitochondrion	69.23	68.62
CDX88109	Canola	mitochondrion	68.93	68.33
CDX80450	Canola	mitochondrion	68.34	67.74
CDY05412	Canola	mitochondrion	68.05	67.45
Bra029414.1-P	Field mustard	plastid	67.46	66.86
CDY05445	Canola	plastid	67.46	66.86
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	65.98	66.17
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	65.68	65.88
Os03t0122300-01	Rice	cytosol	66.57	65.79
EER92960	Sorghum	cytosol	65.38	65.77
KXG26978	Sorghum	cytosol	66.57	65.6
Os04t0581000-01	Rice	cytosol	65.98	65.59
TraesCS2A01G395000.1	Wheat	cytosol	65.38	65.0
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	65.38	64.81
TraesCS2D01G392800.1	Wheat	cytosol	64.79	64.41
EER94585	Sorghum	cytosol	63.91	64.29
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	63.91	64.09
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	64.2	64.01
HORVU0Hr1G005300.1	Barley	cytosol	63.91	63.53
Zm00001d029744_P001	Maize	cytosol	63.02	63.39
TraesCS2B01G413000.1	Wheat	cytosol, nucleus, peroxisome	63.61	63.24
TraesCS4D01G341800.1	Wheat	cytosol	62.72	63.1
GSMUA_Achr1P00770_001	Banana	cytosol	62.72	62.91
HORVU4Hr1G084810.2	Barley	cytosol, peroxisome, plastid	62.43	62.8
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	65.38	62.61
TraesCS4B01G346900.1	Wheat	cytosol	62.13	62.5
GSMUA_Achr5P12830_001	Banana	cytosol	61.24	61.06
Zm00001d027423_P002	Maize	cytosol, nucleus, peroxisome	64.79	59.35
TraesCS5A01G515600.2	Wheat	cytosol	63.31	55.73
VIT_15s0048g02430.t01	Wine grape	cytosol	55.92	54.94
Bra009771.1-P	Field mustard	mitochondrion	66.27	53.59
VIT_02s0025g02960.t01	Wine grape	cytosol	54.73	53.16
VIT_02s0025g02970.t01	Wine grape	cytosol	52.07	50.57
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	39.94	39.59
VIT_16s0013g00730.t01	Wine grape	cytosol	22.49	38.0
VIT_18s0001g03430.t01	Wine grape	cytosol	36.69	37.35
VIT_08s0007g04540.t01	Wine grape	cytosol	40.83	36.6
VIT_13s0067g01020.t01	Wine grape	cytosol	38.76	36.49
VIT_08s0105g00380.t01	Wine grape	cytosol	38.46	36.31
VIT_16s0013g00740.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	36.69	34.93
VIT_18s0001g14310.t01	Wine grape	cytosol	36.69	34.64
VIT_00s0250g00090.t01	Wine grape	cytosol	38.17	34.49
VIT_18s0001g03470.t01	Wine grape	cytosol	32.84	34.47
VIT_18s0001g06690.t01	Wine grape	cytosol	34.02	34.23
VIT_03s0017g00620.t01	Wine grape	cytosol	35.5	34.09
VIT_18s0001g03490.t01	Wine grape	cytosol	33.73	34.03
VIT_04s0023g03370.t01	Wine grape	cytosol	36.39	33.88
HORVU4Hr1G089330.2	Barley	plastid	42.9	33.33
VIT_03s0017g02350.t01	Wine grape	cytosol	34.62	32.96
VIT_03s0017g00710.t01	Wine grape	plastid	33.73	32.85
VIT_02s0025g04720.t01	Wine grape	cytosol, peroxisome, plastid	29.59	28.17
VIT_03s0017g00830.t01	Wine grape	plastid	36.09	22.51
VIT_18s0001g03510.t01	Wine grape	cytosol	36.69	18.24

Protein Annotations

EntrezGene:100854106	wikigene:100854106	Gene3D:2.60.120.330	MapMan:9.2.2.3.1	UniProt:A5BCA1	EMBL:AM454287
ProteinID:CAN76696	ProteinID:CAN76696.1	ProteinID:CBI23094	ProteinID:CBI23094.3	InterPro:DIOX_N	EMBL:FN595247
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016491	GO:GO:0046872	GO:GO:0051553	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	EMBL:KC898187	EntrezGene:LOC100854106	wikigene:LOC100854106	RefSeq:NP_001267994.1	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF371	SUPFAM:SSF51197
TIGR:TC53331	UniParc:UPI00015208F0	ArrayExpress:VIT_16s0098g00860	EnsemblPlantsGene:VIT_16s0098g00860	EnsemblPlants:VIT_16s0098g00860.t01	unigene:Vvi.12771

Description

2ODDlike2 [Source:UniProtKB/TrEMBL;Acc:A5BCA1]

Coordinates

chr16:-:21183195..21186806

Molecular Weight (calculated)

38727.4 Da

IEP (calculated)

6.581

GRAVY (calculated)

-0.428

Length

338 amino acids

Sequence
(BLAST)

001: MESKVLSTGI RYLTLPQSYI RPEPERPRLS QVSECKHVPI IDLGKDVNRA QLIQHIADAC RLYGFFQVIN HGVAAEMMEK MLEVADEFYR LPVEEKMKLY
101: SDDPTKTMRL STSFNVNKEK VHNWRDYLRL HCYPLDQYTP EWPSNPPSFK EIVSSYCKEV RELGFRLQEM ISESLGLEKD HIKNVFGEQG QHMAVNYYPP
201: CPQPELTYGL PGHTDPNALT ILLQDLRVAG LQVLKDGTWL AIKPHPGAFV VNIGDQLQAV SNGKYKSVWH RAVVNAESER LSVASFLCPC NDAVIGPAKP
301: LTEDGSAPIY KNFTYAEYYK KFWGRDLDQE HCLELFKN

Best Arabidopsis Sequence Match ( AT5G24530.1 )
(BLAST)

001: MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N

Arabidopsis Description

DMR6Protein DOWNY MILDEW RESISTANCE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.