Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2D01G392800.1 | Wheat | cytosol | 97.94 | 97.94 |
TraesCS2B01G413000.1 | Wheat | cytosol, nucleus, peroxisome | 97.35 | 97.35 |
HORVU0Hr1G005300.1 | Barley | cytosol | 95.0 | 95.0 |
Os04t0581000-01 | Rice | cytosol | 86.76 | 86.76 |
KXG26978 | Sorghum | cytosol | 81.76 | 81.05 |
GSMUA_Achr8P12320_001 | Banana | cytosol, nucleus, peroxisome | 71.47 | 71.26 |
GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome | 73.24 | 70.54 |
VIT_16s0098g00860.t01 | Wine grape | cytosol, peroxisome, plastid | 65.0 | 65.38 |
PGSC0003DMT400001570 | Potato | cytosol | 64.12 | 64.69 |
VIT_13s0047g00210.t01 | Wine grape | cytosol | 63.82 | 64.39 |
Solyc03g080190.2.1 | Tomato | cytosol, peroxisome, plastid | 62.65 | 63.2 |
KRH53636 | Soybean | cytosol | 62.65 | 63.02 |
KRH64291 | Soybean | cytosol | 62.06 | 62.43 |
TraesCS5A01G515600.2 | Wheat | cytosol | 69.41 | 61.46 |
CDY05412 | Canola | mitochondrion | 61.18 | 61.0 |
AT5G24530.1 | Thale cress | mitochondrion | 61.18 | 61.0 |
CDY05445 | Canola | plastid | 60.59 | 60.41 |
Bra029414.1-P | Field mustard | plastid | 60.59 | 60.41 |
CDX88109 | Canola | mitochondrion | 60.29 | 60.12 |
CDX80450 | Canola | mitochondrion | 59.71 | 59.53 |
PGSC0003DMT400069218 | Potato | cytosol | 59.12 | 58.77 |
Solyc06g073080.2.1 | Tomato | plastid | 54.41 | 57.81 |
TraesCS2A01G394900.1 | Wheat | plastid | 53.24 | 51.86 |
Bra009771.1-P | Field mustard | mitochondrion | 57.94 | 47.13 |
TraesCS7A01G159200.1 | Wheat | plastid | 38.53 | 39.34 |
TraesCS3A01G445000.1 | Wheat | cytosol | 39.12 | 38.0 |
TraesCS4A01G109200.1 | Wheat | cytosol | 38.53 | 35.6 |
TraesCS6A01G033300.1 | Wheat | plastid | 35.29 | 34.68 |
TraesCS2A01G487100.1 | Wheat | cytosol | 27.94 | 34.42 |
TraesCS7A01G037700.1 | Wheat | cytosol | 27.94 | 34.42 |
TraesCS1A01G070200.1 | Wheat | cytoskeleton, cytosol, peroxisome | 36.18 | 34.36 |
TraesCS1A01G008400.1 | Wheat | mitochondrion | 32.94 | 34.36 |
TraesCS6A01G055700.1 | Wheat | cytosol | 34.71 | 34.1 |
TraesCS3A01G351400.2 | Wheat | cytosol | 37.94 | 34.04 |
TraesCS7A01G121400.1 | Wheat | cytosol, peroxisome, plastid | 34.41 | 33.81 |
TraesCS4A01G311000.1 | Wheat | cytosol | 36.76 | 33.78 |
TraesCS6A01G288300.1 | Wheat | plastid | 33.53 | 33.53 |
TraesCS5A01G154900.1 | Wheat | cytosol, nucleus, peroxisome | 35.88 | 33.33 |
TraesCS2A01G538600.1 | Wheat | cytosol | 32.06 | 33.23 |
TraesCS6A01G288400.1 | Wheat | cytosol | 34.41 | 32.77 |
TraesCS7A01G026100.1 | Wheat | cytosol | 30.0 | 32.59 |
TraesCS5A01G513700.1 | Wheat | cytosol, plastid | 32.06 | 32.44 |
TraesCS5A01G048400.1 | Wheat | cytosol | 31.76 | 31.76 |
TraesCS6A01G331400.1 | Wheat | plastid | 30.29 | 30.84 |
TraesCS6A01G031500.1 | Wheat | cytosol | 22.94 | 30.71 |
TraesCS2A01G538700.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 29.41 | 30.67 |
TraesCS6A01G034100.1 | Wheat | cytosol, peroxisome, plastid | 27.94 | 30.65 |
TraesCS2A01G493500.1 | Wheat | golgi | 33.24 | 29.97 |
TraesCS7A01G280900.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 35.0 | 29.17 |
TraesCS3A01G315300.1 | Wheat | cytosol, peroxisome, plastid | 30.29 | 28.69 |
TraesCS6A01G030500.1 | Wheat | plastid | 24.12 | 27.7 |
TraesCS6A01G041800.1 | Wheat | cytosol | 30.0 | 25.95 |
TraesCS6A01G001500.1 | Wheat | cytosol | 30.29 | 23.52 |
Protein Annotations
EnsemblPlants:TraesCS2A01G395000.1 | EnsemblPlantsGene:TraesCS2A01G395000 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF389 | PFAM:PF03171 | PFAM:PF14226 |
PFscan:PS51471 | SEG:seg | SUPFAM:SSF51197 | MapMan:9.2.2.3.1 | : | : |
Description
No Description!
Coordinates
chr2A:-:646621324..646627800
Molecular Weight (calculated)
38605.9 Da
IEP (calculated)
5.260
GRAVY (calculated)
-0.357
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MANQLLSTVA HRDTLPEGYT RPENDRPQLA DVVTDSNIPL IDLASPDKHR VIAEIDQACR TYGFFQIINH GISEELLEKV MAVGLEFFRL PPEEKAKLYS
101: DEPSKKIRLS TSFNVRKETV HNWRDYLRLH CHPLEVFVPD WPSNPETFKE IISTYCREVR LLGLRLLGAI SLGLGLEEDY IENVLGEQEQ HMAVNYYPRC
201: PEPDLTYGLP KHTDPNALTI LLMDPHVSGL QVLKDGAQWI AVDPRPNALV VNLGDQLQAV SNGAYKSVWH RAVVNAARER LSVASFLCPC NSAVIGPADK
301: LVGDGDEPVY RSYTYDEYYK KFWSRNLDQD HCLELFTGQK
101: DEPSKKIRLS TSFNVRKETV HNWRDYLRLH CHPLEVFVPD WPSNPETFKE IISTYCREVR LLGLRLLGAI SLGLGLEEDY IENVLGEQEQ HMAVNYYPRC
201: PEPDLTYGLP KHTDPNALTI LLMDPHVSGL QVLKDGAQWI AVDPRPNALV VNLGDQLQAV SNGAYKSVWH RAVVNAARER LSVASFLCPC NSAVIGPADK
301: LVGDGDEPVY RSYTYDEYYK KFWSRNLDQD HCLELFTGQK
001: MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N
Arabidopsis Description
DMR6Protein DOWNY MILDEW RESISTANCE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.