Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0098g00860.t01 | Wine grape | cytosol, peroxisome, plastid | 76.85 | 76.63 |
| KRH64291 | Soybean | cytosol | 76.56 | 76.33 |
| PGSC0003DMT400001570 | Potato | cytosol | 76.26 | 76.26 |
| Solyc03g080190.2.1 | Tomato | cytosol, peroxisome, plastid | 76.26 | 76.26 |
| KRH53636 | Soybean | cytosol | 75.96 | 75.74 |
| PGSC0003DMT400069218 | Potato | cytosol | 72.11 | 71.05 |
| Solyc06g073080.2.1 | Tomato | plastid | 66.17 | 69.69 |
| CDX88109 | Canola | mitochondrion | 69.14 | 68.33 |
| AT5G24530.1 | Thale cress | mitochondrion | 68.84 | 68.04 |
| CDX80450 | Canola | mitochondrion | 68.55 | 67.74 |
| GSMUA_Achr1P03620_001 | Banana | cytosol, nucleus, peroxisome | 67.66 | 67.66 |
| GSMUA_Achr4P30130_001 | Banana | cytosol, nucleus, peroxisome | 67.36 | 67.36 |
| CDY05445 | Canola | plastid | 67.95 | 67.16 |
| GSMUA_Achr8P12320_001 | Banana | cytosol, nucleus, peroxisome | 67.95 | 67.16 |
| Bra029414.1-P | Field mustard | plastid | 67.95 | 67.16 |
| Os04t0581000-01 | Rice | cytosol | 67.66 | 67.06 |
| CDY05412 | Canola | mitochondrion | 67.66 | 66.86 |
| EER92960 | Sorghum | cytosol | 65.88 | 66.07 |
| KXG26978 | Sorghum | cytosol | 66.77 | 65.6 |
| EER94585 | Sorghum | cytosol | 65.28 | 65.48 |
| GSMUA_Achr2P10240_001 | Banana | cytosol, nucleus, peroxisome | 65.58 | 65.19 |
| Os03t0122300-01 | Rice | cytosol | 65.58 | 64.62 |
| GSMUA_Achr1P00770_001 | Banana | cytosol | 64.39 | 64.39 |
| TraesCS4D01G341800.1 | Wheat | cytosol | 64.09 | 64.29 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome | 67.06 | 64.02 |
| HORVU4Hr1G084810.2 | Barley | cytosol, peroxisome, plastid | 63.8 | 63.99 |
| TraesCS4B01G346900.1 | Wheat | cytosol | 63.8 | 63.99 |
| TraesCS2A01G395000.1 | Wheat | cytosol | 64.39 | 63.82 |
| GSMUA_Achr5P10230_001 | Banana | cytosol, nucleus, peroxisome | 63.8 | 63.8 |
| TraesCS2D01G392800.1 | Wheat | cytosol | 64.09 | 63.53 |
| HORVU0Hr1G005300.1 | Barley | cytosol | 63.8 | 63.24 |
| Zm00001d029744_P001 | Maize | cytosol | 62.91 | 63.1 |
| GSMUA_Achr5P12830_001 | Banana | cytosol | 63.2 | 62.83 |
| TraesCS2B01G413000.1 | Wheat | cytosol, nucleus, peroxisome | 63.2 | 62.65 |
| Zm00001d027423_P002 | Maize | cytosol, nucleus, peroxisome | 65.28 | 59.62 |
| TraesCS5A01G515600.2 | Wheat | cytosol | 64.69 | 56.77 |
| VIT_15s0048g02430.t01 | Wine grape | cytosol | 56.38 | 55.23 |
| Bra009771.1-P | Field mustard | mitochondrion | 66.77 | 53.83 |
| VIT_02s0025g02960.t01 | Wine grape | cytosol | 55.49 | 53.74 |
| VIT_02s0025g02970.t01 | Wine grape | cytosol | 53.71 | 52.01 |
| VIT_07s0005g03150.t01 | Wine grape | cytosol, peroxisome, plastid | 40.65 | 40.18 |
| VIT_16s0013g00730.t01 | Wine grape | cytosol | 23.15 | 39.0 |
| VIT_08s0007g04540.t01 | Wine grape | cytosol | 41.54 | 37.14 |
| VIT_13s0067g01020.t01 | Wine grape | cytosol | 38.87 | 36.49 |
| VIT_18s0001g03430.t01 | Wine grape | cytosol | 35.91 | 36.45 |
| VIT_00s0250g00090.t01 | Wine grape | cytosol | 40.06 | 36.1 |
| VIT_16s0013g00740.t01 | Wine grape | cytosol, nucleus, peroxisome, plastid | 37.98 | 36.06 |
| VIT_18s0001g03470.t01 | Wine grape | cytosol | 33.83 | 35.4 |
| VIT_18s0001g06690.t01 | Wine grape | cytosol | 35.01 | 35.12 |
| VIT_18s0001g03490.t01 | Wine grape | cytosol | 34.72 | 34.93 |
| VIT_08s0105g00380.t01 | Wine grape | cytosol | 36.8 | 34.64 |
| HORVU4Hr1G089330.2 | Barley | plastid | 43.62 | 33.79 |
| VIT_03s0017g00620.t01 | Wine grape | cytosol | 35.01 | 33.52 |
| VIT_03s0017g02350.t01 | Wine grape | cytosol | 35.31 | 33.52 |
| VIT_04s0023g03370.t01 | Wine grape | cytosol | 35.91 | 33.33 |
| VIT_18s0001g14310.t01 | Wine grape | cytosol | 35.31 | 33.24 |
| VIT_03s0017g00710.t01 | Wine grape | plastid | 34.12 | 33.14 |
| VIT_02s0025g04720.t01 | Wine grape | cytosol, peroxisome, plastid | 30.86 | 29.3 |
| VIT_03s0017g00830.t01 | Wine grape | plastid | 35.91 | 22.32 |
| VIT_18s0001g03510.t01 | Wine grape | cytosol | 36.8 | 18.24 |
Protein Annotations
| EntrezGene:100254096 | wikigene:100254096 | Gene3D:2.60.120.330 | MapMan:9.2.2.3.1 | EMBL:AM467920 | ProteinID:CAN63747 |
| ProteinID:CAN63747.1 | ProteinID:CBI29158 | ProteinID:CBI29158.3 | UniProt:D7TF27 | InterPro:DIOX_N | EMBL:FN595767 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | EntrezGene:LOC100254096 |
| wikigene:LOC100254096 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 |
| PANTHER:PTHR10209:SF371 | SUPFAM:SSF51197 | UniParc:UPI00015CC112 | ArrayExpress:VIT_13s0047g00210 | EnsemblPlantsGene:VIT_13s0047g00210 | EnsemblPlants:VIT_13s0047g00210.t01 |
| unigene:Vvi.25961 | RefSeq:XP_002273640 | RefSeq:XP_002273640.1 | RefSeq:XP_019079980.1 | : | : |
Description
No Description!
Coordinates
chr13:-:15729787..15734335
Molecular Weight (calculated)
38339.4 Da
IEP (calculated)
5.756
GRAVY (calculated)
-0.443
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSKVLSTGI PFTTLPENYI RPESERPRLS EIADCENVPI IDLSCDDRAQ IIEQLADACS RYGFFQVINH GVSAEAIEKM LHVANEFFQL PVEEKMKLYS
101: DDPSKTMRLS TSFNVKKEKV HNWRDYLRLH CHPLEQYMPE WPSNPPEFKD TVSNYCVEVR QLGHRLEEAI GESLGLEKDY IRNTLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDSHVAGL QVLKDGKWVA VKPHPGAFVV NIGDQLQALS NGKYRSVWHR ATVNVGKARM SIASFLCPSD DALISPARAL
301: TDEGSAAIYR SFTYAEYYKK FWSRNLDQEH CLEVFKN
101: DDPSKTMRLS TSFNVKKEKV HNWRDYLRLH CHPLEQYMPE WPSNPPEFKD TVSNYCVEVR QLGHRLEEAI GESLGLEKDY IRNTLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDSHVAGL QVLKDGKWVA VKPHPGAFVV NIGDQLQALS NGKYRSVWHR ATVNVGKARM SIASFLCPSD DALISPARAL
301: TDEGSAAIYR SFTYAEYYKK FWSRNLDQEH CLEVFKN
001: MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N
Arabidopsis Description
DMR6Protein DOWNY MILDEW RESISTANCE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.