Factsheet for AT5G24530.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05445	Canola	plastid	88.86	88.86
CDX88109	Canola	mitochondrion	88.86	88.86
Bra029414.1-P	Field mustard	plastid	88.86	88.86
CDY05412	Canola	mitochondrion	88.27	88.27
CDX80450	Canola	mitochondrion	87.68	87.68
Bra009771.1-P	Field mustard	mitochondrion	86.8	70.81
KRH64291	Soybean	cytosol	69.79	70.41
KRH53636	Soybean	cytosol	69.5	70.12
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	68.62	69.23
VIT_13s0047g00210.t01	Wine grape	cytosol	68.04	68.84
Solyc03g080190.2.1	Tomato	cytosol, peroxisome, plastid	66.86	67.66
PGSC0003DMT400069218	Potato	cytosol	67.45	67.25
PGSC0003DMT400001570	Potato	cytosol	66.28	67.06
Solyc06g073080.2.1	Tomato	plastid	61.58	65.62
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	63.64	64.01
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	62.76	63.5
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	62.76	63.5
Os04t0581000-01	Rice	cytosol	63.05	63.24
Os03t0122300-01	Rice	cytosol	63.34	63.16
EER94585	Sorghum	cytosol	62.17	63.1
KXG26978	Sorghum	cytosol	62.76	62.39
TraesCS4D01G341800.1	Wheat	cytosol	61.29	62.2
EER92960	Sorghum	cytosol	61.29	62.2
HORVU4Hr1G084810.2	Barley	cytosol, peroxisome, plastid	61.0	61.9
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	61.58	61.58
TraesCS2A01G395000.1	Wheat	cytosol	61.0	61.18
GSMUA_Achr5P12830_001	Banana	cytosol	60.7	61.06
TraesCS4B01G346900.1	Wheat	cytosol	60.12	61.01
HORVU0Hr1G005300.1	Barley	cytosol	60.7	60.88
Zm00001d029744_P001	Maize	cytosol	59.82	60.71
TraesCS2D01G392800.1	Wheat	cytosol	60.41	60.59
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	59.53	60.24
TraesCS2B01G413000.1	Wheat	cytosol, nucleus, peroxisome	59.82	60.0
GSMUA_Achr1P00770_001	Banana	cytosol	59.24	59.94
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	61.88	59.77
Zm00001d027423_P002	Maize	cytosol, nucleus, peroxisome	61.58	56.91
TraesCS5A01G515600.2	Wheat	cytosol	61.29	54.43
AT4G10490.1	Thale cress	cytosol	52.2	51.15
AT4G10500.1	Thale cress	plastid	51.61	50.43
AT2G44800.1	Thale cress	cytosol, nucleus, peroxisome, plastid	37.83	36.13
AT3G60290.1	Thale cress	cytosol, nucleus, peroxisome	37.54	35.85
AT2G36690.1	Thale cress	cytosol, nucleus, peroxisome	36.95	34.43
AT3G55970.1	Thale cress	cytosol	34.9	32.78
AT4G16330.2	Thale cress	plastid	34.9	32.69
AT3G51240.1	Thale cress	cytosol	34.31	32.68
AT5G63590.1	Thale cress	cytoskeleton, cytosol, peroxisome	29.03	32.14
AT5G05600.1	Thale cress	cytosol	34.6	31.81
AT2G38240.1	Thale cress	plastid	32.84	31.73
HORVU4Hr1G089330.2	Barley	plastid	40.18	31.49
AT5G08640.1	Thale cress	cytosol	30.5	30.95
AT5G07480.1	Thale cress	cytosol	32.26	30.9
AT5G63580.1	Thale cress	cytoskeleton, cytosol, peroxisome	22.58	30.8
AT4G22880.2	Thale cress	cytosol	31.38	30.06
AT3G11180.2	Thale cress	cytosol	34.6	29.28
AT5G43935.1	Thale cress	cytosol	24.93	29.01
AT5G63600.2	Thale cress	cytosol	27.27	28.53
AT5G63595.1	Thale cress	cytoskeleton, cytosol, peroxisome	22.87	27.96

Protein Annotations

Gene3D:2.60.120.330	EntrezGene:832524	MapMan:9.2.2.3.1	ProteinID:AED93322.1	EMBL:AF386975	ArrayExpress:AT5G24530
EnsemblPlantsGene:AT5G24530	RefSeq:AT5G24530	TAIR:AT5G24530	RefSeq:AT5G24530-TAIR-G	EnsemblPlants:AT5G24530.1	TAIR:AT5G24530.1
EMBL:AY081455	EMBL:AY085392	ProteinID:BAB11205.1	InterPro:DIOX_N	Symbol:DMR6	GO:GO:0002229
GO:GO:0002239	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006950	GO:GO:0006952
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009605
GO:GO:0009607	GO:GO:0009617	GO:GO:0009620	GO:GO:0009719	GO:GO:0009751	GO:GO:0009813
GO:GO:0009987	GO:GO:0010150	GO:GO:0016491	GO:GO:0033759	GO:GO:0034785	GO:GO:0042742
GO:GO:0046244	GO:GO:0046872	GO:GO:0051213	GO:GO:0051553	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	RefSeq:NP_197841.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF371	UniProt:Q9FLV0	SUPFAM:SSF51197	UniParc:UPI0000048BA4
SEG:seg	:	:	:	:	:

Description

DMR6Protein DOWNY MILDEW RESISTANCE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV0]

Coordinates

chr5:+:8378759..8383401

Molecular Weight (calculated)

39365.7 Da

IEP (calculated)

5.425

GRAVY (calculated)

-0.443

Length

341 amino acids

Sequence
(BLAST)

001: MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.