Factsheet for TraesCS2B01G413000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G395000.1	Wheat	cytosol	97.35	97.35
TraesCS2D01G392800.1	Wheat	cytosol	97.06	97.06
HORVU0Hr1G005300.1	Barley	cytosol	95.29	95.29
Os04t0581000-01	Rice	cytosol	85.88	85.88
KXG26978	Sorghum	cytosol	81.18	80.47
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	71.47	71.26
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	72.65	69.97
TraesCS4B01G346900.1	Wheat	cytosol	69.12	69.94
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	63.24	63.61
VIT_13s0047g00210.t01	Wine grape	cytosol	62.65	63.2
PGSC0003DMT400001570	Potato	cytosol	62.65	63.2
KRH53636	Soybean	cytosol	61.47	61.83
KRH64291	Soybean	cytosol	61.47	61.83
Solyc03g080190.2.1	Tomato	cytosol, peroxisome, plastid	60.88	61.42
AT5G24530.1	Thale cress	mitochondrion	60.0	59.82
CDY05412	Canola	mitochondrion	59.71	59.53
CDY05445	Canola	plastid	59.12	58.94
Bra029414.1-P	Field mustard	plastid	59.12	58.94
CDX88109	Canola	mitochondrion	58.82	58.65
PGSC0003DMT400069218	Potato	cytosol	58.53	58.19
CDX80450	Canola	mitochondrion	58.24	58.06
Solyc06g073080.2.1	Tomato	plastid	53.82	57.19
TraesCS2B01G412900.1	Wheat	plastid	52.06	50.72
Bra009771.1-P	Field mustard	mitochondrion	56.47	45.93
TraesCS7B01G063700.1	Wheat	plastid	39.12	39.82
TraesCS3B01G479500.1	Wheat	cytosol	39.12	38.22
TraesCS3B01G486500.1	Wheat	cytosol	38.53	37.54
TraesCS1B01G052600.1	Wheat	cytosol	37.35	36.71
TraesCS4B01G195000.1	Wheat	cytosol	38.53	35.6
TraesCS1B01G088600.1	Wheat	cytoskeleton, cytosol, peroxisome	37.35	35.47
TraesCS3B01G444500.1	Wheat	cytosol	35.59	35.28
TraesCS3B01G383900.1	Wheat	cytosol	38.24	34.85
TraesCS6B01G318000.1	Wheat	plastid	34.71	34.71
TraesCS6B01G046800.1	Wheat	plastid	35.29	34.68
TraesCS6B01G044600.1	Wheat	cytosol	35.29	34.48
TraesCS6B01G318100.1	Wheat	plastid	34.41	34.11
TraesCS6B01G317900.1	Wheat	cytosol	26.76	33.7
TraesCS7B01G020000.1	Wheat	plastid	34.12	33.53
TraesCS4B01G344800.1	Wheat	cytosol	31.76	33.33
TraesCS2B01G568800.1	Wheat	cytosol, nucleus, peroxisome	32.06	33.23
TraesCS5B01G153100.1	Wheat	cytosol, nucleus, peroxisome	35.59	33.06
TraesCS4B01G344900.1	Wheat	cytosol, plastid	30.0	33.01
TraesCS6B01G047100.1	Wheat	extracellular, vacuole	33.53	32.76
TraesCS2B01G514200.1	Wheat	cytosol, nucleus, peroxisome	31.47	32.72
TraesCS4B01G003300.1	Wheat	plastid	36.76	32.3
TraesCS4B01G328300.1	Wheat	cytosol	25.29	32.09
TraesCS6B01G362100.1	Wheat	cytosol	31.47	32.04
TraesCS2B01G613300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	32.65	31.81
TraesCS6B01G048100.1	Wheat	plastid	30.59	31.23
TraesCS2B01G568900.1	Wheat	mitochondrion, plastid	30.59	30.95
TraesCS2B01G521500.1	Wheat	golgi	32.94	29.63
TraesCS7B01G180300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	35.0	29.46
TraesCS3B01G351600.1	Wheat	cytosol	30.59	28.97
TraesCS2B01G613000.1	Wheat	cytosol, extracellular, peroxisome	28.24	26.67
TraesCS5B01G053400.2	Wheat	cytosol	30.88	26.58
TraesCS6B01G006200.1	Wheat	cytosol	30.29	23.41

Protein Annotations

EnsemblPlants:TraesCS2B01G413000.1	EnsemblPlantsGene:TraesCS2B01G413000	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF389	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:9.2.2.3.1	:	:

Description

No Description!

Coordinates

chr2B:-:588724331..588730411

Molecular Weight (calculated)

38519.8 Da

IEP (calculated)

5.132

GRAVY (calculated)

-0.353

Length

340 amino acids

Sequence
(BLAST)

001: MANQLLSTVA HRDTLPEGYT RPENDRPQLA DVVTDSNIPL IDLASPDKHL VIAEIDQACR TYGFFQIVNH GISEELLEKV MAVGLEFFRL PPEEKAKLYS
101: DEPSKKIRLS TSFNVRKETV HNWRDYLRLH CHPLEEFVPD WPSNPETFKE IISTYCREVR LLGLRLLGAI SLGLGLEEDY IENVLGEQEQ HMAVNDYPRC
201: PEPDLTYGLP KHTDPNALTI LLMDPHVSGL QVLKNGAQWI AVDSRPNALV VNLGDQLQAL SNGAYKSVWH RAVVNAARER LSVASFLCPC NSTVIGPAAK
301: LVGDGDEPVY RSYTYDEYYK KFWSRNLDQD HCLELFTGQK

Best Arabidopsis Sequence Match ( AT2G44800.1 )
(BLAST)

001: MEETKMSLLD DSFTSAMTLT NSGVPQVPDR YVLPPSQRPA LGSSLGTSET TLPVIDLSLL HQPFLRSLAI HEISMACKEF GFFQVINHGI PSSVVNDALD
101: AATQFFDLPV EEKMLLVSAN VHEPVRYGTS LNHSTDRVHY WRDFIKHYSH PLSKWIDMWP SNPPCYKDKV GKYAEATHLL HKQLIEAISE SLGLEKNYLQ
201: EEIEEGSQVM AVNCYPACPE PEMALGMPPH SDFSSLTILL QSSKGLQIMD CNKNWVCVPY IEGALIVQLG DQVEVMSNGI YKSVIHRVTV NKEVKRLSFA
301: SLHSLPLHKK ISPAPKLVNP NNAPAYGEFS FNDFLNYISS NDFIQERFID TIKKSSS

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IV21]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.