Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- plastid 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G339800.1 | Wheat | cytosol, plastid | 91.26 | 83.93 |
| TraesCS5A01G513700.1 | Wheat | cytosol, plastid | 90.61 | 83.33 |
| TraesCS4B01G344800.1 | Wheat | cytosol | 87.06 | 83.02 |
| TraesCS6B01G362100.1 | Wheat | cytosol | 72.49 | 67.07 |
| Os02t0767300-01 | Rice | cytosol | 65.05 | 60.73 |
| EES07584 | Sorghum | cytosol | 64.4 | 59.94 |
| Zm00001d018184_P001 | Maize | endoplasmic reticulum | 58.9 | 57.78 |
| Zm00001d018181_P001 | Maize | endoplasmic reticulum, nucleus | 58.9 | 57.78 |
| EES00073 | Sorghum | cytosol | 54.69 | 54.87 |
| GSMUA_Achr10P... | Banana | cytosol | 53.07 | 52.4 |
| GSMUA_Achr10P... | Banana | cytosol | 54.05 | 49.85 |
| GSMUA_Achr8P23330_001 | Banana | cytosol | 52.75 | 48.95 |
| GSMUA_Achr3P07030_001 | Banana | cytosol | 52.43 | 48.65 |
| VIT_18s0001g03470.t01 | Wine grape | cytosol | 49.84 | 47.83 |
| AT5G08640.1 | Thale cress | cytosol | 50.49 | 46.43 |
| CDY21556 | Canola | cytoskeleton, cytosol, peroxisome | 50.49 | 46.43 |
| CDX69931 | Canola | cytoskeleton, cytosol, peroxisome | 50.49 | 46.43 |
| Bra009358.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 50.49 | 46.43 |
| KRH53203 | Soybean | cytosol | 48.87 | 45.35 |
| VIT_18s0001g03490.t01 | Wine grape | cytosol | 48.54 | 44.78 |
| Solyc11g013110.1.1 | Tomato | cytosol, plastid | 49.51 | 43.47 |
| KRH18787 | Soybean | cytosol | 46.93 | 43.41 |
| PGSC0003DMT400036565 | Potato | cytosol | 48.87 | 42.9 |
| KRH16579 | Soybean | cytosol, mitochondrion | 40.45 | 41.39 |
| Bra018076.1-P | Field mustard | cytosol | 39.48 | 40.0 |
| CDY39565 | Canola | cytosol | 39.16 | 39.67 |
| CDY48154 | Canola | cytosol | 39.16 | 39.67 |
| AT5G43935.1 | Thale cress | cytosol | 37.54 | 39.59 |
| AT5G63590.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 39.16 | 39.29 |
| CDY69013 | Canola | cytosol | 38.19 | 38.44 |
| Bra038647.1-P | Field mustard | cytosol | 37.86 | 38.11 |
| CDY41522 | Canola | cytosol | 36.57 | 38.05 |
| Bra038648.1-P | Field mustard | cytosol | 36.57 | 38.05 |
| CDY39860 | Canola | cytosol | 37.22 | 37.22 |
| CDX97750 | Canola | cytosol | 26.21 | 36.65 |
| Bra037747.1-P | Field mustard | cytosol | 37.22 | 36.62 |
| CDY31361 | Canola | cytosol | 36.25 | 36.13 |
| CDY41520 | Canola | cytosol | 28.8 | 36.03 |
| CDX81188 | Canola | cytosol | 37.22 | 35.94 |
| Bra029211.1-P | Field mustard | cytosol | 35.92 | 35.81 |
| AT5G63600.2 | Thale cress | cytosol | 36.89 | 34.97 |
| AT5G63580.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 28.16 | 34.8 |
| TraesCS1B01G088600.1 | Wheat | cytoskeleton, cytosol, peroxisome | 39.48 | 34.08 |
| AT5G63595.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 30.74 | 34.05 |
| TraesCS4B01G195000.1 | Wheat | cytosol | 40.13 | 33.7 |
| TraesCS5B01G153100.1 | Wheat | cytosol, nucleus, peroxisome | 38.84 | 32.79 |
| TraesCS7B01G063700.1 | Wheat | plastid | 34.63 | 32.04 |
| TraesCS2B01G613300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 35.92 | 31.81 |
| TraesCS2B01G412900.1 | Wheat | plastid | 35.92 | 31.81 |
| TraesCS6B01G318000.1 | Wheat | plastid | 34.95 | 31.76 |
| TraesCS3B01G383900.1 | Wheat | cytosol | 38.19 | 31.64 |
| TraesCS2B01G613000.1 | Wheat | cytosol, extracellular, peroxisome | 35.92 | 30.83 |
| TraesCS6B01G317900.1 | Wheat | cytosol | 26.86 | 30.74 |
| TraesCS4B01G346900.1 | Wheat | cytosol | 33.33 | 30.65 |
| TraesCS3B01G444500.1 | Wheat | cytosol | 33.33 | 30.03 |
| TraesCS2B01G413000.1 | Wheat | cytosol, nucleus, peroxisome | 33.01 | 30.0 |
| TraesCS6B01G046800.1 | Wheat | plastid | 33.33 | 29.77 |
| TraesCS6B01G318100.1 | Wheat | plastid | 32.69 | 29.45 |
| TraesCS2B01G521500.1 | Wheat | golgi | 35.92 | 29.37 |
| TraesCS4B01G328300.1 | Wheat | cytosol | 24.92 | 28.73 |
| TraesCS7B01G020000.1 | Wheat | plastid | 32.04 | 28.61 |
| TraesCS1B01G052600.1 | Wheat | cytosol | 32.04 | 28.61 |
| CDY41521 | Canola | cytosol, mitochondrion | 1.94 | 28.57 |
| TraesCS6B01G048100.1 | Wheat | plastid | 30.1 | 27.93 |
| TraesCS6B01G047100.1 | Wheat | extracellular, vacuole | 31.07 | 27.59 |
| Bra029212.1-P | Field mustard | cytosol | 37.54 | 27.49 |
| TraesCS3B01G479500.1 | Wheat | cytosol | 30.74 | 27.3 |
| CDY31363 | Canola | cytosol | 37.22 | 27.25 |
| TraesCS6B01G006200.1 | Wheat | cytosol | 38.51 | 27.05 |
| TraesCS4B01G003300.1 | Wheat | plastid | 33.66 | 26.87 |
| TraesCS3B01G486500.1 | Wheat | cytosol | 30.1 | 26.65 |
| TraesCS6B01G044600.1 | Wheat | cytosol | 29.77 | 26.44 |
| TraesCS7B01G180300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 33.98 | 25.99 |
| TraesCS2B01G514200.1 | Wheat | cytosol, nucleus, peroxisome | 26.86 | 25.38 |
| TraesCS2B01G568800.1 | Wheat | cytosol, nucleus, peroxisome | 26.86 | 25.3 |
| TraesCS3B01G351600.1 | Wheat | cytosol | 28.48 | 24.51 |
| TraesCS2B01G568900.1 | Wheat | mitochondrion, plastid | 26.21 | 24.11 |
| TraesCS5B01G053400.2 | Wheat | cytosol | 30.74 | 24.05 |
| VIT_18s0001g03510.t01 | Wine grape | cytosol | 48.87 | 22.21 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G344900.1 | EnsemblPlantsGene:TraesCS4B01G344900 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF165 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | PRINTS:PR00682 | SEG:seg | SUPFAM:SSF51197 | MapMan:9.2.2.5.1 | : |
Description
No Description!
Coordinates
chr4B:-:638174966..638181320
Molecular Weight (calculated)
34160.0 Da
IEP (calculated)
6.101
GRAVY (calculated)
-0.118
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGVVQSVQA LASSLGALPP EFVRPEHERP RATTFRGASP LQIPVVDMSL PDAGCRMVEA ATEWGIFQAV NHGVPADAVA ELQRVGREFF ALPQEEKIWS
101: DNLFHTISPP AAVNHGFWPD KPRGYRQANE AYCGRILRLT LEVLERLSAG LGLEEGAMAE AFGGGDDGLV LIQMVNFYPP CPQPELALGF APHTDLCALT
201: VLVANGVPGL QVSMDGLWYD VEHVPGALIV NVGDQIEIFS NGRYRSVLHR ATVSREKTRM SWPVFVEPRR EYLVAPHPRL VAGEIPAKYD YKAKTFENYR
301: YCRINKLPQ
101: DNLFHTISPP AAVNHGFWPD KPRGYRQANE AYCGRILRLT LEVLERLSAG LGLEEGAMAE AFGGGDDGLV LIQMVNFYPP CPQPELALGF APHTDLCALT
201: VLVANGVPGL QVSMDGLWYD VEHVPGALIV NVGDQIEIFS NGRYRSVLHR ATVSREKTRM SWPVFVEPRR EYLVAPHPRL VAGEIPAKYD YKAKTFENYR
301: YCRINKLPQ
001: MEVERVQDIS SSSLLTEAIP LEFIRSEKEQ PAITTFRGPT PAIPVVDLSD PDEESVRRAV VKASEEWGLF QVVNHGIPTE LIRRLQDVGR KFFELPSSEK
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD
Arabidopsis Description
FLS1Flavonol synthase/flavanone 3-hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q96330]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.