Factsheet for TraesCS2B01G613100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G493500.1
TraesCS2B01G521500.1
TraesCS2B01G613300.1
TraesCS2D01G493400.1
TraesCS3A01G226600.1
TraesCS3B01G257900.2
TraesCS3D01G224600.1
TraesCS4B01G344800.1
TraesCS4B01G344900.1
TraesCS4D01G339800.1
TraesCS5A01G475600.1
TraesCS5A01G513700.1
TraesCS5B01G488900.1
TraesCS5D01G489000.1
TraesCS6A01G331400.1
TraesCS6B01G362100.1
TraesCS6D01G310700.1
TraesCS7B01G038200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13930.1	TraesCS2A01G493500.1	AT3G51240.1	10536025
AT5G13930.1	TraesCS2B01G521500.1	AT3G51240.1	10536025
AT5G13930.1	TraesCS2B01G613300.1	AT3G51240.1	10536025
AT5G13930.1	TraesCS2D01G493400.1	AT3G51240.1	10536025
AT5G13930.1	TraesCS5A01G475600.1	AT3G55120.1	10536025
AT5G13930.1	TraesCS5B01G488900.1	AT3G55120.1	10536025
AT5G13930.1	TraesCS5D01G489000.1	AT3G55120.1	10536025
AT5G13930.1	TraesCS7B01G038200.1	AT3G55120.1	10536025
AT5G13930.1	TraesCS4B01G344800.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS4B01G344900.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS4D01G339800.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS5A01G513700.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS6A01G331400.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS6B01G362100.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS6D01G310700.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS4B01G344800.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS4B01G344900.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS4D01G339800.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS5A01G513700.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS6A01G331400.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS6B01G362100.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS6D01G310700.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS3A01G226600.1	AT5G42800.1	10536025
AT5G13930.1	TraesCS3B01G257900.2	AT5G42800.1	10536025
AT5G13930.1	TraesCS3D01G224600.1	AT5G42800.1	10536025
AT5G13930.1	TraesCS3A01G226600.1	AT5G42800.1	21669202
AT5G13930.1	TraesCS3B01G257900.2	AT5G42800.1	21669202
AT5G13930.1	TraesCS3D01G224600.1	AT5G42800.1	21669202
AT5G13930.1	TraesCS4B01G344800.1	AT5G63590.1	18467451
AT5G13930.1	TraesCS4B01G344900.1	AT5G63590.1	18467451
AT5G13930.1	TraesCS4D01G339800.1	AT5G63590.1	18467451
AT5G13930.1	TraesCS5A01G513700.1	AT5G63590.1	18467451
AT5G13930.1	TraesCS6A01G331400.1	AT5G63590.1	18467451
AT5G13930.1	TraesCS6B01G362100.1	AT5G63590.1	18467451
AT5G13930.1	TraesCS6D01G310700.1	AT5G63590.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G048400.1	Wheat	cytosol	90.98	92.13
TraesCS2B01G038700.1	Wheat	cytosol	90.98	92.13
TraesCS2B01G558400.1	Wheat	cytosol	91.23	91.46
TraesCS2B01G038600.1	Wheat	cytosol	82.71	91.16
GSMUA_Achr6P16370_001	Banana	cytosol, mitochondrion, plastid	67.17	85.62
KRH42776	Soybean	cytosol	53.13	83.14
GSMUA_Achr6P10910_001	Banana	cytosol, mitochondrion	67.92	82.62
VIT_14s0068g00930.t01	Wine grape	cytosol	81.2	82.44
GSMUA_Achr10P...	Banana	cytosol	66.42	81.79
VIT_14s0068g00920.t01	Wine grape	cytosol	80.45	81.68
KRH58872	Soybean	cytosol	79.2	81.44
KRH42759	Soybean	cytosol	79.2	81.44
KRH42778	Soybean	cytosol	79.2	81.44
KRH42780	Soybean	cytosol	79.2	81.44
Solyc09g091510.2.1	Tomato	cytosol, extracellular	79.2	81.23
VIT_05s0136g00260.t01	Wine grape	cytosol	79.2	81.23
KRH42783	Soybean	cytosol	78.95	81.19
KRH42775	Soybean	cytosol	78.95	81.19
KRH42758	Soybean	cytosol	78.95	81.19
KRH42757	Soybean	cytosol	78.95	81.19
PGSC0003DMT400076178	Potato	cytosol	78.95	80.98
TraesCS1B01G041000.1	Wheat	cytosol	79.95	80.76
Solyc05g053550.2.1	Tomato	cytosol, mitochondrion	78.7	80.72
KRH42760	Soybean	cytosol	78.45	80.67
CDX69618	Canola	cytosol	79.7	80.51
CDX78547	Canola	cytosol	79.45	80.46
KRH75544	Soybean	cytosol	78.2	80.41
CDX91090	Canola	cytosol	79.7	80.3
Bra008792.1-P	Field mustard	cytosol	79.45	80.25
CDY09836	Canola	cytosol	79.45	80.25
PGSC0003DMT400049165	Potato	cytosol, mitochondrion	78.2	80.21
KRH37579	Soybean	cytosol	77.94	80.15
CDX70528	Canola	cytosol	79.45	80.05
KRH71115	Soybean	cytosol	77.69	79.9
Bra006224.1-P	Field mustard	cytosol	78.95	79.55
KRG94730	Soybean	cytosol	77.94	79.54
AT5G13930.1	Thale cress	cytosol	78.7	79.49
TraesCS1B01G040000.1	Wheat	cytosol, mitochondrion	78.45	79.24
Bra023441.1-P	Field mustard	cytosol	78.2	79.19
TraesCS1B01G040300.1	Wheat	cytosol, mitochondrion	78.2	78.99
TraesCS1B01G040500.1	Wheat	cytosol	78.95	78.95
TraesCS1B01G040100.1	Wheat	cytosol	77.94	78.73
TraesCS1B01G040200.1	Wheat	cytosol, mitochondrion	78.7	78.11
KRH27737	Soybean	cytosol	75.69	77.64
KRH77699	Soybean	endoplasmic reticulum	75.69	77.64
CDY51056	Canola	cytosol	75.44	76.4
Bra036307.1-P	Field mustard	cytosol	75.19	76.34
Bra020688.1-P	Field mustard	cytosol	74.94	75.89
CDY05664	Canola	cytosol	74.44	75.38
PGSC0003DMT400076179	Potato	cytosol	71.43	75.2
GSMUA_Achr10P...	Banana	mitochondrion	61.9	72.01
CDY07114	Canola	cytosol	73.93	71.95
TraesCS7B01G462200.1	Wheat	cytosol	50.38	67.22
CDY05666	Canola	mitochondrion	66.42	63.4
TraesCS6B01G327900.1	Wheat	cytosol	43.11	51.5
TraesCS6B01G245200.1	Wheat	mitochondrion	43.11	51.19
TraesCS4B01G021600.1	Wheat	cytosol	51.13	50.87
TraesCS5B01G383300.1	Wheat	cytosol, mitochondrion	49.37	50.64
TraesCS5B01G487700.1	Wheat	cytosol	49.87	50.25
TraesCS2B01G072600.1	Wheat	mitochondrion	50.38	50.12
TraesCS6B01G185200.2	Wheat	cytosol, mitochondrion, plastid	47.87	49.1
TraesCS2B01G007000.1	Wheat	cytosol	48.62	48.5
TraesCS2B01G019200.1	Wheat	cytosol	47.12	47.36
TraesCS2B01G041300.1	Wheat	cytosol	45.36	46.89
TraesCS4B01G357800.1	Wheat	cytosol	34.34	45.97
TraesCS2B01G006800.1	Wheat	cytosol	42.61	45.7
TraesCS4B01G357100.1	Wheat	mitochondrion	37.59	45.59
TraesCS2B01G006700.1	Wheat	cytosol	44.61	45.18
TraesCS2B01G006000.1	Wheat	cytosol	44.36	44.92
TraesCS4B01G357700.1	Wheat	mitochondrion	26.57	44.73
TraesCS4B01G357600.1	Wheat	mitochondrion	27.07	44.63
TraesCS6B01G022300.1	Wheat	cytosol	44.61	44.28
TraesCS6B01G022500.1	Wheat	cytosol	45.36	44.04
TraesCS7B01G371700.1	Wheat	plastid	44.86	40.77
TraesCS2B01G006300.1	Wheat	extracellular, golgi	45.11	38.96
TraesCS1B01G176300.1	Wheat	cytosol	35.09	35.9
TraesCS5B01G003100.1	Wheat	cytosol	37.59	35.8

Protein Annotations

KEGG:00941+2.3.1.74	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS	InterPro:Chalcone/stilbene_synthase_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451
ScanProsite:PS00441	PANTHER:PTHR11877	PANTHER:PTHR11877:SF44	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like
EnsemblPlantsGene:TraesCS2B01G613100	EnsemblPlants:TraesCS2B01G613100.1	TIGR:cd00831	SEG:seg	:	:

Description

No Description!

Coordinates

chr2B:+:792484660..792487784

Molecular Weight (calculated)

43692.8 Da

IEP (calculated)

6.448

GRAVY (calculated)

-0.088

Length

399 amino acids

Sequence
(BLAST)

001: MVAATMTVEE VRKAQRAEGP ATVLAIGTAT PANCVYQADY PDYYFRITKS EHLANLKEKF KRMCEKSQIR KRHMHVTEEI LQENPGMCAY MAPSLDARQD
101: IVLAEVPKLG KAAAHKAIKE WGQPLSKITH LIFCTTSGVD MPGADYQLTR MLGLRPSVKR FMMYQQGCFA GGTVLRLAKD LAENNRGARV LVVCSEITAV
201: TFRGPDESHL DSLVGQALFA DGAAAVIIGA DPDESVERPL FQLVSASQTI LPDSEGAIEG HLREAGLTFH LLKDVPGLIS KNIERVLEDA FKPLGIDDWN
301: SIFWVAHPGG PAILDMVEAK ANLNKERMRA TRHVLSEYGN MSSACVLFIL DEMRKRSAED GHTTTGEGMD WGVLFGFGPG LTVETVVLHS VSINAHTIA

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.