CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51056	Canola	cytosol	80.62	85.53
CDY05664	Canola	cytosol	79.19	84.01
CDX78547	Canola	cytosol	73.21	77.67
CDX70528	Canola	cytosol	73.21	77.27
CDX69618	Canola	cytosol	72.49	76.71
CDY09836	Canola	cytosol	72.49	76.71
CDX91090	Canola	cytosol	72.25	76.26
TraesCS2D01G027800.1	Wheat	cytosol	37.32	73.93
VIT_14s0068g00920.t01	Wine grape	cytosol	67.7	72.01
VIT_14s0068g00930.t01	Wine grape	cytosol	67.22	71.5
KRG94730	Soybean	cytosol	66.75	71.36
KRH42778	Soybean	cytosol	66.03	71.13
KRH42780	Soybean	cytosol	66.03	71.13
KRH42759	Soybean	cytosol	66.03	71.13
Solyc09g091510.2.1	Tomato	cytosol, extracellular	66.03	70.95
PGSC0003DMT400076178	Potato	cytosol	66.03	70.95
KRH42775	Soybean	cytosol	65.79	70.88
KRH42783	Soybean	cytosol	65.79	70.88
KRH42758	Soybean	cytosol	65.79	70.88
KRH58872	Soybean	cytosol	65.79	70.88
KRH42757	Soybean	cytosol	65.79	70.88
VIT_05s0136g00260.t01	Wine grape	cytosol	65.79	70.69
KRH75544	Soybean	cytosol	65.31	70.36
KRH42760	Soybean	cytosol	65.31	70.36
Solyc05g053550.2.1	Tomato	cytosol, mitochondrion	65.31	70.18
PGSC0003DMT400049165	Potato	cytosol, mitochondrion	65.31	70.18
KRH71115	Soybean	cytosol	65.07	70.1
KRH37579	Soybean	cytosol	65.07	70.1
KRH77699	Soybean	endoplasmic reticulum	65.07	69.92
KRH27737	Soybean	cytosol	65.07	69.92
GSMUA_Achr6P10910_001	Banana	cytosol, mitochondrion	54.78	69.82
TraesCS2A01G035300.1	Wheat	cytosol	65.79	69.8
TraesCS2D01G027700.1	Wheat	cytosol	65.79	69.8
TraesCS2D01G027900.2	Wheat	cytosol	65.79	69.8
TraesCS2A01G025600.1	Wheat	cytosol	65.55	69.54
TraesCS2B01G038700.1	Wheat	cytosol	65.31	69.29
TraesCS2A01G025700.1	Wheat	cytosol, golgi	65.31	69.29
TraesCS2A01G025500.1	Wheat	cytosol	65.31	69.29
HORVU2Hr1G005220.3	Barley	cytosol	65.31	69.11
TraesCS2B01G558400.1	Wheat	cytosol	65.79	69.1
TraesCS2B01G048400.1	Wheat	cytosol	65.07	69.04
GSMUA_Achr6P16370_001	Banana	cytosol, mitochondrion, plastid	51.67	69.01
TraesCS2D01G034500.1	Wheat	cytosol	65.07	68.86
TraesCS2A01G527700.2	Wheat	cytosol	65.55	68.84
EES09864	Sorghum	cytosol	65.79	68.75
HORVU2Hr1G116390.2	Barley	cytosol	65.31	68.59
EES09858	Sorghum	cytosol	65.79	68.58
EES09865	Sorghum	cytosol	65.55	68.33
GSMUA_Achr10P...	Banana	cytosol	52.87	68.21
Os11t0530600-01	Rice	cytosol, mitochondrion, plasma membrane	64.83	68.09
EES09863	Sorghum	cytosol	65.31	68.08
EES09860	Sorghum	cytosol	65.31	68.08
KXG29016	Sorghum	cytosol	65.31	68.08
EES09859	Sorghum	cytosol	65.31	68.08
EES08604	Sorghum	cytosol	65.31	68.08
PGSC0003DMT400076179	Potato	cytosol	61.72	68.07
CDY07114	Canola	cytosol	66.75	68.05
EES09862	Sorghum	cytosol	65.07	67.83
Zm00001d052673_P001	Maize	cytosol	64.59	67.5
KRH42776	Soybean	cytosol	41.15	67.45
Zm00001d007403_P001	Maize	cytosol	64.35	67.08
TraesCS2B01G613100.1	Wheat	cytosol	63.4	66.42
EES14634	Sorghum	cytosol	62.68	65.83
TraesCS2B01G038600.1	Wheat	cytosol	56.94	65.75
TraesCS5D01G488700.1	Wheat	cytosol	61.48	65.06
TraesCS5D01G488600.1	Wheat	cytosol	61.48	65.06
TraesCS1B01G040300.1	Wheat	cytosol, mitochondrion	61.24	64.81
TraesCS1B01G041000.1	Wheat	cytosol	61.24	64.81
TraesCS1A01G032100.1	Wheat	cytosol	61.0	64.56
TraesCS1B01G040000.1	Wheat	cytosol, mitochondrion	60.77	64.3
TraesCS1D01G033600.1	Wheat	cytosol	61.24	64.16
TraesCS1D01G033800.1	Wheat	cytosol	61.0	64.07
TraesCS1B01G040100.1	Wheat	cytosol	60.29	63.8
TraesCS1B01G040200.1	Wheat	cytosol, mitochondrion	61.24	63.68
TraesCS1A01G032300.1	Wheat	cytosol	60.53	63.57
HORVU1Hr1G004830.1	Barley	cytosol	60.05	63.22
TraesCS1B01G040500.1	Wheat	cytosol	60.05	62.91
HORVU2Hr1G004170.4	Barley	plastid	65.07	62.82
HORVU1Hr1G089540.1	Barley	mitochondrion	59.09	61.9
GSMUA_Achr10P...	Banana	mitochondrion	48.33	58.89
Os07t0214900-00	Rice	cytosol	56.46	58.56
TraesCS2D01G530600.1	Wheat	cytosol, plastid	65.55	57.32
CDX69091	Canola	cytosol	35.17	37.5
CDX72506	Canola	cytosol	34.93	37.24
CDX75466	Canola	cytosol	34.93	37.24
CDY40656	Canola	cytosol	34.93	37.24
CDY34811	Canola	cytosol	34.93	37.24
CDY58814	Canola	cytosol	34.69	36.99
CDY21499	Canola	mitochondrion	34.45	36.73
CDX83215	Canola	mitochondrion	34.45	36.73
CDY17490	Canola	cytosol	34.45	36.73
CDX93339	Canola	mitochondrion	33.49	35.62
CDY18415	Canola	cytosol, mitochondrion	33.25	35.37

Protein Annotations

KEGG:00941+2.3.1.74	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	GO:A0A078EWR4	EnsemblPlants:CDY05666	ProteinID:CDY05666
ProteinID:CDY05666.1	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
EnsemblPlantsGene:GSBRNA2T00120661001	InterPro:IPR016039	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	ScanProsite:PS00441
PANTHER:PTHR11877	PANTHER:PTHR11877:SF43	MetaCyc:PWY-5135	MetaCyc:PWY-6316	MetaCyc:PWY-6787	MetaCyc:PWY-7397
InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like	UniPathway:UPA00154	UniParc:UPI0004EED91D	:

Description

BnaC02g38710D

Coordinates

chrLK031963:-:745311..747931

Molecular Weight (calculated)

46626.7 Da

IEP (calculated)

8.465

GRAVY (calculated)

-0.093

Length

418 amino acids

Sequence
(BLAST)

001: MVYTKTKPYC LFRFGTVRFY HIEQTYTQNQ NIKLQSNQTG ISITMVMGAL SLDEIRKAQR ADGPASILAI GTSTANPPNQ VTQAEYPDYY FRITNSEHMT
101: DLKEKFKRMC DKSVIRKRYM HLTEEFLKDN PNICAFMAPS LDVRQDILVA EVPKLGKEAA VKAIKEWGQP KSKITHLVFC TTSGVAMPGA DYQLIKLLGL
201: CPSVKRVMMY HQGCYAGGTV LRLAKDIAEN NRGARVLIIC AEITVVTFRG PSETQLDSLV GQSFFGDGTA ALIVGSDPDT SVGEKPIFEM VSAAQTILPD
301: SQGAIEGHLK EVALTFHLLK TVPGLISKNI EKCLEEAFKP LGISDWNSLF WIAHPGGPSI LDHVEIKLGL KAEKMKATRH VLSEYGNMSS ACIIHLSGHW
401: FWFKHVLTMH NIQWWQIG

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.