Factsheet for HORVU2Hr1G004170.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G110130.3
HORVU3Hr1G056560.2
HORVU5Hr1G112670.1
HORVU6Hr1G047380.1
HORVU6Hr1G048650.1
HORVU6Hr1G056710.2
HORVU6Hr1G080360.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13930.1	HORVU2Hr1G110130.3	AT3G51240.1	10536025
AT5G13930.1	HORVU5Hr1G112670.1	AT3G55120.1	10536025
AT5G13930.1	HORVU6Hr1G056710.2	AT5G08640.1	18467451
AT5G13930.1	HORVU6Hr1G080360.1	AT5G08640.1	18467451
AT5G13930.1	HORVU6Hr1G056710.2	AT5G08640.1	21669202
AT5G13930.1	HORVU6Hr1G080360.1	AT5G08640.1	21669202
AT5G13930.1	HORVU3Hr1G056560.2	AT5G42800.1	10536025
AT5G13930.1	HORVU6Hr1G047380.1	AT5G42800.1	10536025
AT5G13930.1	HORVU6Hr1G048650.1	AT5G42800.1	10536025
AT5G13930.1	HORVU3Hr1G056560.2	AT5G42800.1	21669202
AT5G13930.1	HORVU6Hr1G047380.1	AT5G42800.1	21669202
AT5G13930.1	HORVU6Hr1G048650.1	AT5G42800.1	21669202
AT5G13930.1	HORVU6Hr1G056710.2	AT5G63590.1	18467451
AT5G13930.1	HORVU6Hr1G080360.1	AT5G63590.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G025700.1	Wheat	cytosol, golgi	89.84	98.73
TraesCS2B01G038700.1	Wheat	cytosol	89.84	98.73
HORVU2Hr1G005220.3	Barley	cytosol	89.84	98.48
TraesCS2D01G027900.2	Wheat	cytosol	88.91	97.72
TraesCS2A01G025600.1	Wheat	cytosol	88.91	97.72
TraesCS2D01G027700.1	Wheat	cytosol	88.91	97.72
HORVU2Hr1G116390.2	Barley	cytosol	89.15	96.98
TraesCS2A01G025500.1	Wheat	cytosol	88.22	96.95
TraesCS2B01G038600.1	Wheat	cytosol	80.6	96.41
TraesCS2D01G027800.1	Wheat	cytosol	45.96	94.31
GSMUA_Achr6P16370_001	Banana	cytosol, mitochondrion, plastid	62.59	86.58
KRH42776	Soybean	cytosol	50.12	85.1
VIT_14s0068g00930.t01	Wine grape	cytosol	76.44	84.22
GSMUA_Achr6P10910_001	Banana	cytosol, mitochondrion	63.74	84.15
VIT_14s0068g00920.t01	Wine grape	cytosol	76.21	83.97
Solyc09g091510.2.1	Tomato	cytosol, extracellular	75.29	83.8
PGSC0003DMT400076178	Potato	cytosol	75.06	83.55
Solyc05g053550.2.1	Tomato	cytosol, mitochondrion	74.6	83.03
KRH42758	Soybean	cytosol	74.36	82.99
KRH42759	Soybean	cytosol	74.36	82.99
KRH42775	Soybean	cytosol	74.36	82.99
KRH42778	Soybean	cytosol	74.36	82.99
KRH42780	Soybean	cytosol	74.36	82.99
KRH42783	Soybean	cytosol	74.36	82.99
KRH58872	Soybean	cytosol	74.36	82.99
CDX78547	Canola	cytosol	75.29	82.74
KRH75544	Soybean	cytosol	74.13	82.73
KRH42757	Soybean	cytosol	74.13	82.73
CDX91090	Canola	cytosol	75.52	82.58
CDX69618	Canola	cytosol	75.29	82.53
PGSC0003DMT400049165	Potato	cytosol, mitochondrion	74.13	82.52
VIT_05s0136g00260.t01	Wine grape	cytosol	74.13	82.52
KRH42760	Soybean	cytosol	73.9	82.47
KRH37579	Soybean	cytosol	73.9	82.47
CDX70528	Canola	cytosol	75.29	82.32
CDY09836	Canola	cytosol	75.06	82.28
KRH71115	Soybean	cytosol	73.67	82.22
GSMUA_Achr10P...	Banana	cytosol	61.43	82.1
Bra008792.1-P	Field mustard	cytosol	74.83	82.03
KRG94730	Soybean	cytosol	73.67	81.59
Bra006224.1-P	Field mustard	cytosol	74.6	81.57
Bra023441.1-P	Field mustard	cytosol	74.13	81.47
AT5G13930.1	Thale cress	cytosol	74.13	81.27
KRH77699	Soybean	endoplasmic reticulum	71.59	79.69
KRH27737	Soybean	cytosol	71.13	79.18
HORVU1Hr1G089540.1	Barley	mitochondrion	72.75	78.95
HORVU1Hr1G004830.1	Barley	cytosol	72.06	78.59
CDY51056	Canola	cytosol	70.9	77.92
Bra036307.1-P	Field mustard	cytosol	70.44	77.61
Bra020688.1-P	Field mustard	cytosol	70.44	77.41
PGSC0003DMT400076179	Potato	cytosol	67.67	77.31
CDY05664	Canola	cytosol	70.21	77.16
CDY07114	Canola	cytosol	69.75	73.66
GSMUA_Achr10P...	Banana	mitochondrion	57.51	72.59
CDY05666	Canola	mitochondrion	62.82	65.07
HORVU3Hr1G006040.1	Barley	cytosol	50.12	54.52
HORVU6Hr1G055000.1	Barley	cytosol, mitochondrion	47.81	52.27
HORVU4Hr1G003250.1	Barley	cytosol	48.73	50.36
HORVU6Hr1G074060.2	Barley	cytosol	45.5	48.88
HORVU2Hr1G003280.1	Barley	cytosol	44.57	48.61
HORVU7Hr1G009190.1	Barley	cytosol	42.26	47.41
HORVU1Hr1G064330.1	Barley	cytosol	42.96	47.09
HORVU7Hr1G024480.2	Barley	cytosol	42.49	46.7
HORVU2Hr1G002640.1	Barley	cytosol	40.65	44.67
HORVU6Hr1G003020.2	Barley	cytosol	42.03	44.07
HORVU5Hr1G093950.1	Barley	cytosol	39.49	42.43
HORVU7Hr1G020920.2	Barley	cytosol, peroxisome	41.11	38.36
HORVU5Hr1G000690.2	Barley	cytosol, peroxisome	34.41	32.6
HORVU1Hr1G042510.2	Barley	cytosol	33.26	29.63

Protein Annotations

KEGG:00941+2.3.1.74	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	UniProt:A0A287GXU4	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS
InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:HORVU2Hr1G004170	EnsemblPlants:HORVU2Hr1G004170.4	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	ScanProsite:PS00441	PANTHER:PTHR11877	PANTHER:PTHR11877:SF44
InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI000B46914B	SEG:seg	:

Description

No Description!

Coordinates

chrchr2H:-:9398287..9446222

Molecular Weight (calculated)

47433.2 Da

IEP (calculated)

7.186

GRAVY (calculated)

-0.201

Length

433 amino acids

Sequence
(BLAST)

001: TPHDTTICTH SAASGKLRRH TDPPSRSQPS RPLVRTESSM AATMTVEEVR KAQRAEGPAT VLAIGTATPA NCVYQADYPD YYFKVTKSDH MADLKEKFKR
101: MCDKSQIRKR YMHLTEEILQ ENPNMCAYMA PSLDARQDIV VVEVPKLGKA AAQKAIKEWG QPRSKITHLV FCTTSGVDMP GADYQLTKML GLRPSVKRLM
201: MYQQGCFAGG TVLRLAKDLA ENNRGARVLV VCSEITAVTF RGPHESHLDS LVGQALFGDG AAAVIIGADP DVSVERPLFQ LVSASQTILP DSEGAIDGHL
301: REVGLTFHLL KDVPGLISKN IERALEDAFK PLGIDDWNSV FWIAHPGGPA ILDMVEAKVN LNKERMRATR HVLSEYGNMS SACVLFIMDE MRKRSAEDGH
401: TTTGEGMDWG VLFGFGPGLT VETVVLHSVP VTA

Best Arabidopsis Sequence Match ( AT5G13930.1 )
(BLAST)

001: MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL

Arabidopsis Description

CHSTT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UKS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.