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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • peroxisome 1
  • cytosol 2
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU2Hr1G066630.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G02050.1 HORVU2Hr1G066630.1 AT1G62940.1 23632852
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G157500.1 Wheat cytosol 77.57 96.67
TraesCS1B01G176300.1 Wheat cytosol 77.37 96.41
TraesCS1A01G160300.1 Wheat cytosol 77.16 96.15
Os10t0484800-01 Rice cytosol 72.63 90.75
Zm00001d032662_P001 Maize plastid 67.49 84.1
Zm00001d013991_P001 Maize mitochondrion 68.72 79.33
EER91459 Sorghum cytosol 72.84 72.99
VIT_15s0021g02170.t01 Wine grape cytosol 49.79 62.21
KRH75257 Soybean cytosol 49.59 62.11
CDX93339 Canola mitochondrion 49.59 61.32
CDY18415 Canola cytosol, mitochondrion 49.38 61.07
AT1G02050.1 Thale cress mitochondrion 49.18 60.51
PGSC0003DMT400095725 Potato plastid 49.18 60.35
AT4G00040.1 Thale cress cytosol, mitochondrion 47.12 59.48
CDX83215 Canola mitochondrion 47.53 58.93
CDY21499 Canola mitochondrion 47.33 58.67
Bra000559.1-P Field mustard mitochondrion 47.12 58.42
Solyc01g090600.2.1 Tomato cytosol, extracellular, mitochondrion, peroxisome 42.8 58.1
HORVU5Hr1G000690.2 Barley cytosol, peroxisome 43.21 45.95
HORVU6Hr1G055000.1 Barley cytosol, mitochondrion 32.3 39.65
HORVU2Hr1G003280.1 Barley cytosol 30.66 37.53
HORVU3Hr1G006040.1 Barley cytosol 30.66 37.44
HORVU1Hr1G004830.1 Barley cytosol 30.45 37.28
HORVU1Hr1G089540.1 Barley mitochondrion 30.04 36.59
HORVU6Hr1G003020.2 Barley cytosol 31.07 36.56
HORVU2Hr1G116390.2 Barley cytosol 29.63 36.18
HORVU6Hr1G074060.2 Barley cytosol 29.84 35.98
HORVU2Hr1G005220.3 Barley cytosol 29.22 35.95
HORVU4Hr1G003250.1 Barley cytosol 30.25 35.08
HORVU7Hr1G024480.2 Barley cytosol 28.4 35.03
HORVU7Hr1G009190.1 Barley cytosol 27.78 34.97
HORVU5Hr1G093950.1 Barley cytosol 28.81 34.74
HORVU1Hr1G064330.1 Barley cytosol 28.19 34.68
HORVU2Hr1G002640.1 Barley cytosol 27.78 34.26
HORVU2Hr1G004170.4 Barley plastid 29.63 33.26
HORVU7Hr1G020920.2 Barley cytosol, peroxisome 29.42 30.82
Bra017147.1-P Field mustard cytosol, peroxisome, plastid 51.85 28.19
Protein Annotations
MapMan:21.8.1.4Gene3D:3.40.47.10UniProt:A0A287FAM9InterPro:Chalcone/stilbene_synth_CInterPro:Chalcone/stilbene_synthase_NGO:GO:0003674
GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0016740GO:GO:0016746
GO:GO:0016747EnsemblPlantsGene:HORVU1Hr1G042510EnsemblPlants:HORVU1Hr1G042510.2InterPro:IPR016039PFAM:PF00195PFAM:PF02797
PANTHER:PTHR11877PANTHER:PTHR11877:SF31InterPro:Polyketide_synthase_type-IIISUPFAM:SSF53901InterPro:Thiolase-likeUniParc:UPI000B479ECF
SEG:seg:::::
Description
No Description!
Coordinates
chrchr1H:+:308765150..308777342
Molecular Weight (calculated)
52721.6 Da
IEP (calculated)
8.327
GRAVY (calculated)
-0.273
Length
486 amino acids
Sequence
(BLAST)
001: MGEPKKGVRG KILHHAALAQ KLEENQMTSP QPTILFSFHS CRRSLRPNTK QPCKPEPKQP HGEHPLLKAN HPSRTQRNHR SGEILNLRQK EATSVCESAM
101: SGLGSIGGGG NGRSHGSGGK AKLLALGKGL PEQVLPQEKL VETYLQDTSC DDPATRAKLE RLCKTTTVRT RYTVMSKELL DEHPELKTEG TPTLTPRLDI
201: CNAAVLELGA AAARAALGEW GRPAAHITHL VYISSSELRL PGGDLFLATR LGLSPNTVRT SLLFLGCSGG AAALRTAKDI AENNPGSRVL VIAAETTVLG
301: FRPPSADRPY DLVGAALFGD GASAAIIGAS PISAEEDPFL ELEFSTQEFL PGTDKVIDGK ISEEGINFKL GRDLPEKIES RIEGFCRILM DKVGIKKFND
401: VFWAVHPGGP AILNRLEVCL ELDPDKLKIS RKALMNYGNV SSNTVFYVLE YLRDELKKGT IREEWGLILA FGPGITFEGM LVRGIN
Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.