Factsheet for HORVU6Hr1G074060.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G278200.1	Wheat	cytosol	94.29	94.76
TraesCS6A01G298400.1	Wheat	cytosol	94.29	94.76
TraesCS6B01G327900.1	Wheat	cytosol	78.41	94.61
EER99419	Sorghum	cytosol	77.67	77.48
Zm00001d021562_P001	Maize	cytosol, mitochondrion	76.67	76.87
Zm00001d000438_P001	Maize	cytosol, mitochondrion	76.67	76.87
Os07t0271500-01	Rice	cytosol	68.98	69.15
HORVU7Hr1G009190.1	Barley	cytosol	57.32	59.84
HORVU6Hr1G055000.1	Barley	cytosol, mitochondrion	58.31	59.34
HORVU7Hr1G024480.2	Barley	cytosol	57.82	59.14
HORVU2Hr1G003280.1	Barley	cytosol	56.82	57.68
HORVU4Hr1G003250.1	Barley	cytosol	58.31	56.09
HORVU2Hr1G002640.1	Barley	cytosol	52.36	53.55
HORVU6Hr1G003020.2	Barley	cytosol	52.85	51.57
HORVU2Hr1G005220.3	Barley	cytosol	49.13	50.13
HORVU2Hr1G116390.2	Barley	cytosol	48.64	49.25
HORVU5Hr1G093950.1	Barley	cytosol	49.13	49.13
HORVU7Hr1G020920.2	Barley	cytosol, peroxisome	55.34	48.06
HORVU1Hr1G089540.1	Barley	mitochondrion	46.9	47.37
HORVU1Hr1G004830.1	Barley	cytosol	46.4	47.1
HORVU3Hr1G006040.1	Barley	cytosol	46.4	46.98
HORVU2Hr1G004170.4	Barley	plastid	48.88	45.5
HORVU1Hr1G064330.1	Barley	cytosol	41.19	42.03
HORVU5Hr1G000690.2	Barley	cytosol, peroxisome	37.97	33.48
HORVU1Hr1G042510.2	Barley	cytosol	35.98	29.84
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.23	0.69

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	UniProt:A0A287UP20	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009813	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	GO:GO:0042802	EnsemblPlantsGene:HORVU6Hr1G074060
EnsemblPlants:HORVU6Hr1G074060.2	InterPro:IPR016039	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877
PANTHER:PTHR11877:SF34	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI000B47AAE0	SEG:seg

Description

No Description!

Coordinates

chrchr6H:-:512226012..512227677

Molecular Weight (calculated)

43455.3 Da

IEP (calculated)

6.456

GRAVY (calculated)

0.047

Length

403 amino acids

Sequence
(BLAST)

001: MGSVPAPAAT PSVREIWRAR RADGPAAVLA IGTANPAHCV PQDEFPDFYF RATNSDHLTA LKAKFKRVFQ KLGVEKRYLH HTEELIRAHP EFLDDEAASL
101: DARLDIVATA VPDLAAEASR KAIAEWGRPA ADITHLVVTT NSGAHIPGVD FRLIALLGLR PSVRRTMLYL NGCFAGSAAL RLAKDLAENN RGARVLVVCA
201: ELTLMLFGGP KEGSFERLIH QGLFGDGAGA VVVGADPLGP GEHALFEMMS AAQTVIPDSD DAITMHVTKG GFGGNISTRQ VPVFIGDNVE RCLHDSLEPL
301: GIAAKWNDLF WAVHPGSSAI LDRIDTVLQL ESEKLAASRR VLSDYGNMFG VTIIFVLDEL RRRLREQQGV GGVPEWGVMM TFGPGLTVET MVLHATGHVH
401: ASP

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.