Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 1
- cytosol 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G197900.1 | Wheat | cytosol | 71.46 | 97.59 |
| TraesCS6A01G215600.1 | Wheat | mitochondrion | 95.71 | 95.23 |
| TraesCS6B01G245200.1 | Wheat | mitochondrion | 78.54 | 92.56 |
| HORVU4Hr1G003250.1 | Barley | cytosol | 79.04 | 74.7 |
| Zm00001d040483_P001 | Maize | cytosol | 54.29 | 72.39 |
| Zm00001d040497_P001 | Maize | mitochondrion | 69.95 | 69.95 |
| Zm00001d040479_P001 | Maize | mitochondrion | 70.2 | 69.85 |
| Os11t0529125-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 13.13 | 68.42 |
| Zm00001d007717_P001 | Maize | mitochondrion, plastid | 54.8 | 62.36 |
| EES15556 | Sorghum | cytosol, mitochondrion | 58.59 | 60.89 |
| HORVU7Hr1G009190.1 | Barley | cytosol | 57.58 | 59.07 |
| OQU86627 | Sorghum | mitochondrion | 55.05 | 58.6 |
| HORVU7Hr1G024480.2 | Barley | cytosol | 58.08 | 58.38 |
| HORVU6Hr1G074060.2 | Barley | cytosol | 59.34 | 58.31 |
| HORVU2Hr1G003280.1 | Barley | cytosol | 58.33 | 58.19 |
| HORVU2Hr1G005220.3 | Barley | cytosol | 52.53 | 52.66 |
| HORVU2Hr1G116390.2 | Barley | cytosol | 52.02 | 51.76 |
| HORVU2Hr1G002640.1 | Barley | cytosol | 51.26 | 51.52 |
| HORVU1Hr1G089540.1 | Barley | mitochondrion | 50.76 | 50.38 |
| HORVU6Hr1G003020.2 | Barley | cytosol | 52.27 | 50.12 |
| HORVU5Hr1G093950.1 | Barley | cytosol | 50.76 | 49.88 |
| HORVU3Hr1G006040.1 | Barley | cytosol | 49.75 | 49.5 |
| HORVU1Hr1G004830.1 | Barley | cytosol | 48.48 | 48.36 |
| HORVU2Hr1G004170.4 | Barley | plastid | 52.27 | 47.81 |
| HORVU7Hr1G020920.2 | Barley | cytosol, peroxisome | 53.79 | 45.91 |
| HORVU1Hr1G064330.1 | Barley | cytosol | 43.43 | 43.54 |
| HORVU5Hr1G000690.2 | Barley | cytosol, peroxisome | 38.64 | 33.48 |
| HORVU1Hr1G042510.2 | Barley | cytosol | 39.65 | 32.3 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 3.54 | 0.74 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:50.2.3 | EMBL:AK368199 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N | UniProt:F2DWD1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 |
| GO:GO:0016746 | GO:GO:0016747 | EnsemblPlantsGene:HORVU6Hr1G055000 | EnsemblPlants:HORVU6Hr1G055000.1 | InterPro:IPR016039 | PFAM:PF00195 |
| PFAM:PF02797 | PIRSF:PIRSF000451 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF29 | InterPro:Polyketide_synthase_type-III | SUPFAM:SSF53901 |
| InterPro:Thiolase-like | UniParc:UPI0002007238 | SEG:seg | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DWD1]
Coordinates
chrchr6H:+:349381510..349383173
Molecular Weight (calculated)
42642.6 Da
IEP (calculated)
6.955
GRAVY (calculated)
0.045
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MALLGNLTAS PAATIIRKMR QAERADGPAS MLAIGTANPA NCVRQDEYAD YYFRITQKQH LTKLKSKLSR ICDRSAIKKR YFHHTEELLQ YHPEFIDRTL
101: PSLDARMDIA ATAVPDLAAA AAGKAIAEWG RPAADITHLV VSTYSGAHMP GADLRLASLL GLDPSVRRTM LYLNGCSSGS AALRLAKDIA ENNRGARVLV
201: ACAELTLILF RAPDEAHVDT IIMQALFGDG AAAVIVGAEP DASAERPIFE MVAAAQSVIP ETTHGAVGRL REDGLVFNPS FEMPALIREN IEQCMADAVA
301: PLGLSGGWND LFWAVHPGGR AILDSVEAGL RLEPKKLTAS RHVLSEYGNM SGPTVIFVLD EIRRRREHVV GGHGLGVLLG LGPGVSVETM LLRATW
101: PSLDARMDIA ATAVPDLAAA AAGKAIAEWG RPAADITHLV VSTYSGAHMP GADLRLASLL GLDPSVRRTM LYLNGCSSGS AALRLAKDIA ENNRGARVLV
201: ACAELTLILF RAPDEAHVDT IIMQALFGDG AAAVIVGAEP DASAERPIFE MVAAAQSVIP ETTHGAVGRL REDGLVFNPS FEMPALIREN IEQCMADAVA
301: PLGLSGGWND LFWAVHPGGR AILDSVEAGL RLEPKKLTAS RHVLSEYGNM SGPTVIFVLD EIRRRREHVV GGHGLGVLLG LGPGVSVETM LLRATW
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.