Factsheet for TraesCS6D01G197900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040483_P001	Maize	cytosol	74.14	72.39
TraesCS6A01G215600.1	Wheat	mitochondrion	98.97	72.11
HORVU6Hr1G055000.1	Barley	cytosol, mitochondrion	97.59	71.46
Os11t0529125-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	18.28	69.74
TraesCS6B01G245200.1	Wheat	mitochondrion	76.55	66.07
Zm00001d040479_P001	Maize	mitochondrion	73.79	53.77
Zm00001d040497_P001	Maize	mitochondrion	72.76	53.28
EES15556	Sorghum	cytosol, mitochondrion	60.34	45.93
TraesCS2D01G016200.1	Wheat	cytosol	63.1	45.86
TraesCS2D01G022700.1	Wheat	cytosol, mitochondrion, plastid	62.41	45.25
OQU86627	Sorghum	mitochondrion	57.59	44.89
TraesCS7D01G047000.1	Wheat	cytosol, plastid	61.03	44.47
TraesCS6D01G278200.1	Wheat	cytosol	61.03	44.14
TraesCS7D01G046500.1	Wheat	unclear	60.0	44.05
TraesCS1D01G359600.1	Wheat	cytosol	58.97	43.4
TraesCS2D01G051300.1	Wheat	cytosol	59.66	43.14
TraesCS3D01G500500.1	Wheat	cytosol	59.66	43.14
Zm00001d007717_P001	Maize	mitochondrion, plastid	51.72	43.1
TraesCS7D01G046700.1	Wheat	cytosol, mitochondrion	58.62	43.04
TraesCS4D01G351300.1	Wheat	mitochondrion	57.93	42.21
TraesCS7D01G089300.1	Wheat	mitochondrion	56.55	41.31
TraesCS2D01G030600.1	Wheat	mitochondrion	54.83	41.19
TraesCS2D01G016100.1	Wheat	cytosol	54.83	40.36
TraesCS2D01G027900.2	Wheat	cytosol	54.48	40.1
TraesCS2D01G034500.1	Wheat	cytosol	54.14	39.75
TraesCS2D01G027700.1	Wheat	cytosol	53.79	39.59
TraesCS5D01G488700.1	Wheat	cytosol	52.76	38.73
TraesCS5D01G488600.1	Wheat	cytosol	52.76	38.73
TraesCS1D01G033800.1	Wheat	cytosol	52.07	37.94
TraesCS1D01G033600.1	Wheat	cytosol	51.38	37.34
TraesCS6D01G018500.1	Wheat	plastid	54.83	36.3
TraesCS1D01G157500.1	Wheat	cytosol	45.17	33.59
TraesCS2D01G530600.1	Wheat	cytosol, plastid	53.45	32.43
TraesCS2D01G027800.1	Wheat	cytosol	21.38	29.38
TraesCS5D01G003600.1	Wheat	cytosol	41.72	28.74
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.1	0.48

Protein Annotations

EnsemblPlants:TraesCS6D01G197900.1	EnsemblPlantsGene:TraesCS6D01G197900	Gene3D:3.40.47.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N
InterPro:IPR016039	InterPro:Polyketide_synthase_type-III	InterPro:Thiolase-like	PANTHER:PTHR11877	PANTHER:PTHR11877:SF34	PFAM:PF00195
PFAM:PF02797	SEG:seg	SUPFAM:SSF53901	TIGR:cd00831	MapMan:50.2.3	:

Description

No Description!

Coordinates

chr6D:+:276014661..276015961

Molecular Weight (calculated)

30598.0 Da

IEP (calculated)

5.588

GRAVY (calculated)

0.238

Length

290 amino acids

Sequence
(BLAST)

001: MDIAATAVPD LAAAAAGKAI AEWGRPAADI THLVVSTYSG AHMPGVDLRL ASLLGLDPSV RRTMLYLNGC SSGSAALRVA KDIAENNRGA RVLVACAELT
101: LILFRAPDEA HVDTIIMQAL FGDGAAAVIV GAEPDASAER PIFEMVAASQ SVIPESTHGA VGRLREDGLV FNPSFEMPAL IRENIEQCMA DAVGPLGLSG
201: GWNDLFWAVH PGGRAILDSV EAGLRLEPKK LTASRHVLSE YGNMSGPTVI FVLDEIRRRR EHVVGRHGLG VLLGLGPGVS VETMVLRATW

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.