Factsheet for TraesCS7D01G046500.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

mitochondrion 1
cytosol 2
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	cytosol, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G046700.1	Wheat	cytosol, mitochondrion	95.19	95.19
TraesCS4A01G438100.1	Wheat	cytosol	93.16	93.16
TraesCS4A01G438200.1	Wheat	cytosol	92.66	92.66
HORVU7Hr1G009190.1	Barley	cytosol	88.86	90.93
TraesCS4A01G436400.1	Wheat	cytosol, plastid	90.63	90.63
TraesCS4A01G436200.1	Wheat	cytosol, plastid	90.63	90.63
TraesCS4A01G437900.1	Wheat	unclear	93.16	84.21
TraesCS7D01G047000.1	Wheat	cytosol, plastid	79.75	79.15
TraesCS2D01G016200.1	Wheat	cytosol	67.09	66.42
TraesCS2D01G022700.1	Wheat	cytosol, mitochondrion, plastid	66.58	65.75
TraesCS2D01G051300.1	Wheat	cytosol	65.06	64.09
TraesCS3D01G500500.1	Wheat	cytosol	64.81	63.84
TraesCS2D01G016100.1	Wheat	cytosol	62.53	62.69
EER95816	Sorghum	cytosol	68.1	62.56
TraesCS7D01G089300.1	Wheat	mitochondrion	61.27	60.96
TraesCS6D01G278200.1	Wheat	cytosol	61.27	60.35
TraesCS6D01G197900.1	Wheat	cytosol	44.05	60.0
TraesCS1D01G359600.1	Wheat	cytosol	56.2	56.35
TraesCS2D01G030600.1	Wheat	mitochondrion	52.91	54.15
TraesCS4D01G351300.1	Wheat	mitochondrion	52.41	52.01
TraesCS2D01G027800.1	Wheat	cytosol	26.33	49.29
TraesCS2D01G027900.2	Wheat	cytosol	48.1	48.22
TraesCS2D01G034500.1	Wheat	cytosol	47.85	47.85
TraesCS2D01G027700.1	Wheat	cytosol	47.59	47.72
TraesCS6D01G018500.1	Wheat	plastid	51.65	46.58
TraesCS5D01G488600.1	Wheat	cytosol	46.08	46.08
TraesCS5D01G488700.1	Wheat	cytosol	46.08	46.08
TraesCS1D01G033600.1	Wheat	cytosol	45.57	45.11
TraesCS1D01G033800.1	Wheat	cytosol	45.06	44.72
TraesCS2D01G530600.1	Wheat	cytosol, plastid	47.34	39.12
TraesCS1D01G157500.1	Wheat	cytosol	35.19	35.64
TraesCS5D01G003600.1	Wheat	cytosol	36.2	33.97
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.8	0.79

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF34	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS7D01G046500	EnsemblPlants:TraesCS7D01G046500.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr7D:-:24020049..24021236

Molecular Weight (calculated)

41602.8 Da

IEP (calculated)

5.497

GRAVY (calculated)

0.150

Length

395 amino acids

Sequence
(BLAST)

001: MASSSSIPAT TVREIRVAQR ADGPAAVLAI GTANPPHCVP QGDYPDYYFR VTNSDHLTDL KPTFAKLCGM TGIGRRFFHH TDELLAAHPG MSLDARLDVV
101: ATAAPELAAS AAASAIAEWG RPAGDITHLV VSTNAGSHAP GTDVRLVSLL GLRHDVLRTV LQLNGCASGC AALRLAKDLA ENNRGARVLV ACVELTVTAF
201: RAPDEADSFD TLIPQGLFGD GAGAVIVGAD PDVHERPLFE MVSASQYVIP DTEHMLTVQL GSGGIGGTIA TGLPRLAAGI VERCLLDAFG NHLAIVGGVV
301: EWNNLFWAVH PGSSAMLDHI VRALRLAPGK LAASRTVVRE YGNMLGATVI FVLDEVRRQR EDPEGEGASH DEDWGVMMGF GPGFTVETML LHAAT

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.