Factsheet for TraesCS2D01G030600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G041300.1	Wheat	cytosol	93.78	93.78
TraesCS4D01G351300.1	Wheat	mitochondrion	77.2	74.87
EES15184	Sorghum	cytosol	73.83	69.51
TraesCS6D01G018500.1	Wheat	plastid	77.2	68.04
Os10t0177300-00	Rice	cytosol, mitochondrion, peroxisome	55.7	67.82
Os05t0212900-00	Rice	cytosol	65.8	64.8
Os10t0167900-00	Rice	cytosol	65.8	63.66
Os10t0158400-00	Rice	cytosol	65.54	63.57
Os10t0168500-00	Rice	cytosol, peroxisome, plastid	43.26	63.02
Os05t0213100-00	Rice	cytosol, peroxisome, plastid	67.36	60.89
Os05t0212600-00	Rice	cytosol	46.63	59.6
TraesCS1D01G359600.1	Wheat	cytosol	60.62	59.39
Os10t0162856-00	Rice	cytosol	65.54	58.43
Zm00001d016014_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion	58.03	56.42
TraesCS6D01G197900.1	Wheat	cytosol	41.19	54.83
TraesCS2D01G022700.1	Wheat	cytosol, mitochondrion, plastid	56.48	54.5
TraesCS7D01G046500.1	Wheat	unclear	54.15	52.91
TraesCS6D01G278200.1	Wheat	cytosol	54.92	52.87
TraesCS2D01G051300.1	Wheat	cytosol	53.89	51.87
TraesCS3D01G500500.1	Wheat	cytosol	53.89	51.87
TraesCS2D01G016200.1	Wheat	cytosol	53.11	51.38
TraesCS2D01G016100.1	Wheat	cytosol	52.33	51.27
TraesCS7D01G046700.1	Wheat	cytosol, mitochondrion	52.33	51.14
TraesCS7D01G089300.1	Wheat	mitochondrion	52.59	51.13
TraesCS7D01G047000.1	Wheat	cytosol, plastid	52.07	50.5
TraesCS2D01G027800.1	Wheat	cytosol	24.87	45.5
TraesCS2D01G027900.2	Wheat	cytosol	46.37	45.43
TraesCS2D01G027700.1	Wheat	cytosol	45.85	44.92
TraesCS2D01G034500.1	Wheat	cytosol	45.85	44.81
TraesCS1D01G033600.1	Wheat	cytosol	45.08	43.61
TraesCS1D01G033800.1	Wheat	cytosol	44.82	43.47
TraesCS5D01G488700.1	Wheat	cytosol	44.3	43.29
TraesCS5D01G488600.1	Wheat	cytosol	44.3	43.29
TraesCS1D01G157500.1	Wheat	cytosol	39.64	39.23
TraesCS2D01G530600.1	Wheat	cytosol, plastid	45.6	36.82
TraesCS5D01G003600.1	Wheat	cytosol	39.9	36.58
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.11	0.64

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF23	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS2D01G030600	EnsemblPlants:TraesCS2D01G030600.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr2D:+:12425964..12427648

Molecular Weight (calculated)

41987.9 Da

IEP (calculated)

6.393

GRAVY (calculated)

-0.034

Length

386 amino acids

Sequence
(BLAST)

001: MAARTNGKMV IRQHGEGPAA MLAMGTANPT NLLLPQDVFT DNLFRLSKCD HLTELKEKMN RICQKTGIEK RHFHLTEETV DAHPEFLDRE LPSLDARIEM
101: VTIAVPKLAQ SAAAKAITEW GRPATDITHL VFSTYSAWEA PSADLKLATL LGLRPTVCRT ILSLHGCYGG GRALHLAKEL AENNRGARIL VACAETTLVC
201: FGSPDGANLV GHALFGDGAG AIIVGAGPFD EGERPLFEMV TATQTTIPRT EHVLGMQATA GGIDFHLAIQ VPMLIGQNVE LCLLDAFDGD APRSWNELFW
301: AVHPGGRPIL DNIDTVLKLE PGKLAASRHV LREYGNMSGA TIVFVLDELR RRRKEEDGGH LLPEWGAMLA FGPGITIETM LLRSPR

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.