Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G015500.1 | Wheat | cytosol, plastid | 89.5 | 96.08 |
| TraesCS6B01G022500.1 | Wheat | cytosol | 88.58 | 94.4 |
| HORVU6Hr1G003020.2 | Barley | cytosol | 85.39 | 90.56 |
| TraesCS4D01G351300.1 | Wheat | mitochondrion | 73.74 | 81.16 |
| TraesCS2D01G030600.1 | Wheat | mitochondrion | 68.04 | 77.2 |
| EES15184 | Sorghum | cytosol | 62.79 | 67.07 |
| Os10t0177300-00 | Rice | cytosol, mitochondrion, peroxisome | 45.89 | 63.41 |
| Os05t0212900-00 | Rice | cytosol | 56.62 | 63.27 |
| Os10t0158400-00 | Rice | cytosol | 56.62 | 62.31 |
| Os10t0167900-00 | Rice | cytosol | 56.16 | 61.65 |
| Os10t0168500-00 | Rice | cytosol, peroxisome, plastid | 35.84 | 59.25 |
| Os05t0213100-00 | Rice | cytosol, peroxisome, plastid | 57.08 | 58.55 |
| Os10t0162856-00 | Rice | cytosol | 57.08 | 57.74 |
| Os05t0212600-00 | Rice | cytosol | 39.73 | 57.62 |
| TraesCS1D01G359600.1 | Wheat | cytosol | 51.6 | 57.36 |
| Zm00001d016014_P001 | Maize | cytosol, endoplasmic reticulum, mitochondrion | 51.14 | 56.42 |
| TraesCS6D01G197900.1 | Wheat | cytosol | 36.3 | 54.83 |
| TraesCS2D01G022700.1 | Wheat | cytosol, mitochondrion, plastid | 48.86 | 53.5 |
| TraesCS6D01G278200.1 | Wheat | cytosol | 47.95 | 52.37 |
| TraesCS2D01G051300.1 | Wheat | cytosol | 47.49 | 51.87 |
| TraesCS3D01G500500.1 | Wheat | cytosol | 47.49 | 51.87 |
| TraesCS2D01G016100.1 | Wheat | cytosol | 46.58 | 51.78 |
| TraesCS7D01G046500.1 | Wheat | unclear | 46.58 | 51.65 |
| TraesCS7D01G089300.1 | Wheat | mitochondrion | 46.58 | 51.39 |
| TraesCS2D01G016200.1 | Wheat | cytosol | 46.8 | 51.38 |
| TraesCS7D01G046700.1 | Wheat | cytosol, mitochondrion | 45.21 | 50.13 |
| TraesCS7D01G047000.1 | Wheat | cytosol, plastid | 44.75 | 49.25 |
| TraesCS2D01G027800.1 | Wheat | cytosol | 22.83 | 47.39 |
| TraesCS2D01G027900.2 | Wheat | cytosol | 42.24 | 46.95 |
| TraesCS2D01G034500.1 | Wheat | cytosol | 42.24 | 46.84 |
| TraesCS2D01G027700.1 | Wheat | cytosol | 41.78 | 46.45 |
| TraesCS1D01G033600.1 | Wheat | cytosol | 41.1 | 45.11 |
| TraesCS1D01G033800.1 | Wheat | cytosol | 40.87 | 44.97 |
| TraesCS5D01G488700.1 | Wheat | cytosol | 39.95 | 44.3 |
| TraesCS5D01G488600.1 | Wheat | cytosol | 39.95 | 44.3 |
| TraesCS1D01G157500.1 | Wheat | cytosol | 34.7 | 38.97 |
| TraesCS2D01G530600.1 | Wheat | cytosol, plastid | 41.55 | 38.08 |
| TraesCS5D01G003600.1 | Wheat | cytosol | 34.47 | 35.87 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 2.51 | 0.58 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:50.2.3 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016747 | InterPro:IPR016039 |
| PFAM:PF00195 | PFAM:PF02797 | PIRSF:PIRSF000451 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF23 | InterPro:Polyketide_synthase_type-III |
| SUPFAM:SSF53901 | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS6D01G018500 | EnsemblPlants:TraesCS6D01G018500.1 | TIGR:cd00831 | SEG:seg |
Description
No Description!
Coordinates
chr6D:+:7551863..7553310
Molecular Weight (calculated)
46532.7 Da
IEP (calculated)
6.610
GRAVY (calculated)
-0.097
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLKLHSITK LATSDPCPAN KSSAPASERS AMGSIGTANG NGIGHGGAAV ARRQHAEGPA AMLGIGTANP TGVEVPQNVF AENLFRVTKS DHLTELQQKL
101: TRICEKTGID KRHFHLTEET LVAHPELYDQ DAPSLDSRLA MTVDAVPKLA QCAAAKAIAE WGRPASEITH LVFSTYSAWG APSADLRLAT LLGLRPTVNR
201: TILSLHGCYG GGRALGLARE LAENNRGARV LVACAEITLV CFGGPDGGNL VGHAIFGDGA GAVIVGAGPF RDGEQSPIFE MVHATQTTLP KTEHVLGMQV
301: SGSGVDFHLA IQVPTLIGQN VERCLLDAFR GGDDEDDDGG AHLPSPLSGN GKWNELFWAV HPGGRQILDN IDKVLQLEPE KLGASRHVLR EYGNMSGATI
401: VFVLDELRRR RSLLPEWGAM LAFGPGVTIE TMVLRCPR
101: TRICEKTGID KRHFHLTEET LVAHPELYDQ DAPSLDSRLA MTVDAVPKLA QCAAAKAIAE WGRPASEITH LVFSTYSAWG APSADLRLAT LLGLRPTVNR
201: TILSLHGCYG GGRALGLARE LAENNRGARV LVACAEITLV CFGGPDGGNL VGHAIFGDGA GAVIVGAGPF RDGEQSPIFE MVHATQTTLP KTEHVLGMQV
301: SGSGVDFHLA IQVPTLIGQN VERCLLDAFR GGDDEDDDGG AHLPSPLSGN GKWNELFWAV HPGGRQILDN IDKVLQLEPE KLGASRHVLR EYGNMSGATI
401: VFVLDELRRR RSLLPEWGAM LAFGPGVTIE TMVLRCPR
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.