Factsheet for TraesCS6A01G015500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G022500.1	Wheat	cytosol	96.81	96.11
HORVU6Hr1G003020.2	Barley	cytosol	93.38	92.25
TraesCS6D01G018500.1	Wheat	plastid	96.08	89.5
TraesCS6A01G015300.1	Wheat	cytosol	83.58	84.62
TraesCS5A01G526900.1	Wheat	cytosol, mitochondrion	79.17	80.95
EES15184	Sorghum	cytosol	68.14	67.8
Os10t0177300-00	Rice	cytosol, mitochondrion, peroxisome	49.75	64.04
Os05t0212900-00	Rice	cytosol	61.03	63.52
Os10t0158400-00	Rice	cytosol	61.27	62.81
Os10t0167900-00	Rice	cytosol	60.29	61.65
Os10t0168500-00	Rice	cytosol, peroxisome, plastid	39.22	60.38
TraesCS5A01G379400.1	Wheat	mitochondrion	56.13	59.79
Os05t0213100-00	Rice	cytosol, peroxisome, plastid	61.76	59.02
TraesCS5A01G379500.1	Wheat	cytosol, mitochondrion	55.88	58.61
TraesCS5A01G379600.1	Wheat	cytosol	49.51	58.55
Os05t0212600-00	Rice	cytosol	43.14	58.28
Os10t0162856-00	Rice	cytosol	61.76	58.2
Zm00001d016014_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion	54.9	56.42
TraesCS6A01G298400.1	Wheat	cytosol	51.96	52.87
TraesCS2A01G021700.1	Wheat	cytosol	51.47	52.5
TraesCS4A01G436200.1	Wheat	cytosol, plastid	50.74	52.41
TraesCS4A01G436400.1	Wheat	cytosol, plastid	50.49	52.15
TraesCS6A01G215600.1	Wheat	mitochondrion	50.49	51.76
TraesCS4A01G438200.1	Wheat	cytosol	49.75	51.39
TraesCS4A01G438100.1	Wheat	cytosol	49.75	51.39
TraesCS7A01G093900.1	Wheat	mitochondrion	48.53	50.25
TraesCS4A01G392800.1	Wheat	cytosol, mitochondrion	41.91	49.85
TraesCS4A01G292500.1	Wheat	cytosol	47.3	48.49
TraesCS4A01G437600.1	Wheat	cytosol	47.06	48.24
TraesCS2A01G014800.1	Wheat	cytosol	46.08	47.72
TraesCS2A01G035300.1	Wheat	cytosol	45.1	46.7
TraesCS4A01G437900.1	Wheat	unclear	49.75	46.45
TraesCS2A01G025700.1	Wheat	cytosol, golgi	44.61	46.19
TraesCS2A01G025600.1	Wheat	cytosol	44.61	46.19
TraesCS2A01G025500.1	Wheat	cytosol	44.61	46.19
TraesCS1A01G032100.1	Wheat	cytosol	44.61	46.08
TraesCS1A01G032300.1	Wheat	cytosol	44.36	45.48
TraesCS2A01G527700.2	Wheat	cytosol	44.36	45.48
TraesCS1A01G160300.1	Wheat	cytosol	37.25	38.97
TraesCS5A01G002900.1	Wheat	cytosol	37.01	35.78
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	2.7	0.58

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF23	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS6A01G015500	EnsemblPlants:TraesCS6A01G015500.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr6A:+:7697466..7698787

Molecular Weight (calculated)

43480.0 Da

IEP (calculated)

6.458

GRAVY (calculated)

-0.092

Length

408 amino acids

Sequence
(BLAST)

001: MGSIGTTNGS GIGHGSAAVA RRQHAEGPAA MLGIGTANPT GVEVPQNIFA ENLFRVTKSD HLTELQQKLT RICEKTGIDK RHFHLTEETL VAHPELYDHD
101: AQSLDNRLAM TVDAVPKLAQ CAAAKAISEW GRPASEITHL VFSTYSAWGA PSADLRLATL LGLRPTVSRT ILSLHGCYGG GRALGLAREL AENNRGARVL
201: VACAEITLVC FGGPDGGNLV GHALFGDGAG AVIVGAGPFR DGEQSPIFEM VHATQTTVPK TEHALGMQVS GSGVDFHLAI QVPTLIGQNV ERCLLDAFRG
301: GDDDDDDGHG AHLPSPLSGN GKWNDLFWAV HPGGRPILDN IDKVLQLEPE KLGASRHVLR EYGNMSGATI VFVLDELRRR RSLLPEWGAM LAFGPGVTIE
401: TMVLRCPR

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.