Factsheet for TraesCS5A01G379600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G379500.1	Wheat	cytosol, mitochondrion	95.65	84.83
TraesCS5A01G379400.1	Wheat	mitochondrion	91.01	81.98
HORVU5Hr1G093950.1	Barley	cytosol	87.25	74.69
TraesCS1D01G359600.1	Wheat	cytosol	75.07	65.74
OQU85107	Sorghum	cytosol	71.88	62.16
OQU85124	Sorghum	cytosol	71.59	61.9
KXG36274	Sorghum	cytosol	69.86	60.71
EER99418	Sorghum	cytosol	69.86	60.25
EES08732	Sorghum	cytosol	69.28	59.16
EES09995	Sorghum	cytosol	69.28	59.16
EES15677	Sorghum	cytosol	66.96	57.04
TraesCS5A01G526900.1	Wheat	cytosol, mitochondrion	61.74	53.38
Os07t0501100-01	Rice	cytosol	62.32	53.09
TraesCS6A01G015300.1	Wheat	cytosol	60.87	52.11
TraesCS2A01G021700.1	Wheat	cytosol	58.55	50.5
TraesCS6A01G015500.1	Wheat	cytosol, plastid	58.55	49.51
TraesCS6A01G215600.1	Wheat	mitochondrion	57.1	49.5
TraesCS4A01G436200.1	Wheat	cytosol, plastid	55.07	48.1
TraesCS7A01G093900.1	Wheat	mitochondrion	54.49	47.72
TraesCS6A01G298400.1	Wheat	cytosol	55.36	47.63
TraesCS4A01G436400.1	Wheat	cytosol, plastid	54.49	47.59
TraesCS4A01G438100.1	Wheat	cytosol	53.04	46.33
TraesCS4A01G438200.1	Wheat	cytosol	53.04	46.33
TraesCS4A01G292500.1	Wheat	cytosol	53.04	45.98
TraesCS4A01G437600.1	Wheat	cytosol	53.04	45.98
TraesCS4A01G392800.1	Wheat	cytosol, mitochondrion	44.06	44.31
TraesCS2A01G014800.1	Wheat	cytosol	50.43	44.16
TraesCS4A01G437900.1	Wheat	unclear	54.78	43.25
TraesCS2A01G035300.1	Wheat	cytosol	48.7	42.64
TraesCS2A01G025700.1	Wheat	cytosol, golgi	48.7	42.64
TraesCS2A01G025600.1	Wheat	cytosol	48.41	42.39
TraesCS2A01G025500.1	Wheat	cytosol	47.83	41.88
TraesCS2A01G527700.2	Wheat	cytosol	48.12	41.71
TraesCS1A01G032100.1	Wheat	cytosol	46.09	40.25
TraesCS1A01G032300.1	Wheat	cytosol	45.8	39.7
TraesCS1A01G160300.1	Wheat	cytosol	41.16	36.41
TraesCS5A01G002900.1	Wheat	cytosol	38.84	31.75
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	2.61	0.48

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF34	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS5A01G379600	EnsemblPlants:TraesCS5A01G379600.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr5A:+:577268625..577269662

Molecular Weight (calculated)

37150.9 Da

IEP (calculated)

5.656

GRAVY (calculated)

0.083

Length

345 amino acids

Sequence
(BLAST)

001: MHICGELLCK MFSCPGKNSG IERRYVHLDE ELLGAHPDFS DRALPTLDAR IDMASAAVPE LAASAAARAI AEWGRPAADV THLVFSTYSG GKAPSADLRL
101: ASLLGLRPTV SRTILSLNGC SGGGRALQLA KELAENNRGA RVLVACSELT LIGFYGPQEG RLDTILGNGI FGDGAGAVIV GADPVDCIER PLFEMAFATQ
201: TTIPETENEI TTRLMKGGLD FHVSIRVPKL LKSNIERCLI DTFESIGISA EWNDLFWAIH PGGRAILDHV EQLLGLGVEK LAASRRVLRE YGNMSAATVI
301: FVLDELRRRR ARGEEVAEWG VMMAFGPGIT IETMVLHAAG SLKEN

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.