Factsheet for TraesCS5A01G526900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G351300.1	Wheat	mitochondrion	94.99	95.23
TraesCS4B01G357600.1	Wheat	mitochondrion	56.89	93.8
TraesCS4B01G357700.1	Wheat	mitochondrion	55.64	93.67
TraesCS4B01G357800.1	Wheat	cytosol	69.92	93.62
TraesCS6A01G015300.1	Wheat	cytosol	81.95	81.14
TraesCS6A01G015500.1	Wheat	cytosol, plastid	80.95	79.17
EES15184	Sorghum	cytosol	69.92	68.05
Os10t0177300-00	Rice	cytosol, mitochondrion, peroxisome	51.88	65.3
Os10t0158400-00	Rice	cytosol	63.91	64.07
Os05t0212900-00	Rice	cytosol	62.41	63.52
TraesCS5A01G379400.1	Wheat	mitochondrion	59.4	61.88
TraesCS5A01G379600.1	Wheat	cytosol	53.38	61.74
Os10t0167900-00	Rice	cytosol	61.65	61.65
Os10t0168500-00	Rice	cytosol, peroxisome, plastid	40.85	61.51
TraesCS5A01G379500.1	Wheat	cytosol, mitochondrion	59.4	60.93
Os10t0162856-00	Rice	cytosol	63.91	58.89
Os05t0213100-00	Rice	cytosol, peroxisome, plastid	62.16	58.08
Os05t0212600-00	Rice	cytosol	43.11	56.95
Zm00001d016014_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion	55.89	56.17
TraesCS6A01G215600.1	Wheat	mitochondrion	53.88	54.02
TraesCS6A01G298400.1	Wheat	cytosol	53.38	53.12
TraesCS4A01G436200.1	Wheat	cytosol, plastid	52.38	52.91
TraesCS4A01G438100.1	Wheat	cytosol	52.38	52.91
TraesCS4A01G438200.1	Wheat	cytosol	52.38	52.91
TraesCS4A01G436400.1	Wheat	cytosol, plastid	52.13	52.66
TraesCS2A01G021700.1	Wheat	cytosol	51.88	51.75
TraesCS4A01G292500.1	Wheat	cytosol	50.13	50.25
TraesCS4A01G437600.1	Wheat	cytosol	49.12	49.25
TraesCS7A01G093900.1	Wheat	mitochondrion	48.62	49.24
TraesCS4A01G392800.1	Wheat	cytosol, mitochondrion	42.11	48.98
TraesCS2A01G014800.1	Wheat	cytosol	47.62	48.22
TraesCS4A01G437900.1	Wheat	unclear	51.38	46.91
TraesCS1A01G032100.1	Wheat	cytosol	46.12	46.58
TraesCS1A01G032300.1	Wheat	cytosol	45.86	45.98
TraesCS2A01G025700.1	Wheat	cytosol, golgi	45.11	45.69
TraesCS2A01G025600.1	Wheat	cytosol	44.86	45.43
TraesCS2A01G035300.1	Wheat	cytosol	44.86	45.43
TraesCS2A01G527700.2	Wheat	cytosol	44.86	44.97
TraesCS2A01G025500.1	Wheat	cytosol	44.36	44.92
TraesCS1A01G160300.1	Wheat	cytosol	37.59	38.46
TraesCS5A01G002900.1	Wheat	cytosol	39.1	36.97
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	2.51	0.53

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF23	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS5A01G526900	EnsemblPlants:TraesCS5A01G526900.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr5A:+:687655112..687656427

Molecular Weight (calculated)

42512.3 Da

IEP (calculated)

6.639

GRAVY (calculated)

-0.002

Length

399 amino acids

Sequence
(BLAST)

001: MAMGSCGTSG GMAGRRHAAM LGIGTANPTG VLVPQDVFAE NLFRVTNSDH LPELKEKLRR ICEKSGIERR HFHLTEETLA AHPELFDREL PSLDTRVDMT
101: ADAVPKLAQC AAAKAIAEWG RPTADITHLV FSTYSACQAP TADLRLATLL GLRPTVSRTM LSLHGCYGGG RALSLAKELA ENNRGARVLV ACSEMTLVCF
201: GAPDGGNIVG HALFGDGAGA VVIGAGPFLD GERRPIFEMV SATQTTIPRT EHALGMRVSG GGVDFHLAIQ VPTLVGQNVE QCLLDAFRSA IVDDDDGGAA
301: PPPSPCSGNG NGRWNDLFWA VHPGGRPILD NINKVLMLEP EKLAASRHVL REYGNMSGAT IVFVLDELRR GRSPLPEWGA LLAFGPGITI EAMVLRCPR

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.