Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G379600.1 | Wheat | cytosol | 84.83 | 95.65 |
| TraesCS5A01G379400.1 | Wheat | mitochondrion | 92.8 | 94.26 |
| HORVU5Hr1G093950.1 | Barley | cytosol | 79.43 | 76.67 |
| TraesCS1D01G359600.1 | Wheat | cytosol | 76.61 | 75.63 |
| OQU85107 | Sorghum | cytosol | 74.04 | 72.18 |
| OQU85124 | Sorghum | cytosol | 74.04 | 72.18 |
| EES08732 | Sorghum | cytosol | 72.75 | 70.05 |
| EES09995 | Sorghum | cytosol | 72.75 | 70.05 |
| KXG36274 | Sorghum | cytosol | 71.47 | 70.03 |
| EER99418 | Sorghum | cytosol | 71.72 | 69.75 |
| EES15677 | Sorghum | cytosol | 70.18 | 67.41 |
| Os07t0501100-01 | Rice | cytosol | 64.52 | 61.98 |
| TraesCS5A01G526900.1 | Wheat | cytosol, mitochondrion | 60.93 | 59.4 |
| TraesCS6A01G015300.1 | Wheat | cytosol | 61.18 | 59.06 |
| TraesCS6A01G215600.1 | Wheat | mitochondrion | 59.9 | 58.54 |
| TraesCS2A01G021700.1 | Wheat | cytosol | 59.9 | 58.25 |
| TraesCS4A01G436200.1 | Wheat | cytosol, plastid | 57.84 | 56.96 |
| TraesCS4A01G436400.1 | Wheat | cytosol, plastid | 57.33 | 56.46 |
| TraesCS7A01G093900.1 | Wheat | mitochondrion | 57.07 | 56.35 |
| TraesCS6A01G298400.1 | Wheat | cytosol | 57.84 | 56.11 |
| TraesCS6A01G015500.1 | Wheat | cytosol, plastid | 58.61 | 55.88 |
| TraesCS4A01G292500.1 | Wheat | cytosol | 57.07 | 55.78 |
| TraesCS4A01G438100.1 | Wheat | cytosol | 56.3 | 55.44 |
| TraesCS4A01G438200.1 | Wheat | cytosol | 56.3 | 55.44 |
| TraesCS4A01G437600.1 | Wheat | cytosol | 55.78 | 54.52 |
| TraesCS4A01G392800.1 | Wheat | cytosol, mitochondrion | 47.56 | 53.94 |
| TraesCS2A01G014800.1 | Wheat | cytosol | 53.73 | 53.05 |
| TraesCS2A01G025700.1 | Wheat | cytosol, golgi | 52.19 | 51.52 |
| TraesCS2A01G035300.1 | Wheat | cytosol | 51.93 | 51.27 |
| TraesCS2A01G025600.1 | Wheat | cytosol | 51.93 | 51.27 |
| TraesCS4A01G437900.1 | Wheat | unclear | 57.58 | 51.26 |
| TraesCS2A01G025500.1 | Wheat | cytosol | 51.16 | 50.51 |
| TraesCS2A01G527700.2 | Wheat | cytosol | 51.67 | 50.5 |
| TraesCS1A01G032100.1 | Wheat | cytosol | 49.61 | 48.86 |
| TraesCS1A01G032300.1 | Wheat | cytosol | 49.36 | 48.24 |
| TraesCS1A01G160300.1 | Wheat | cytosol | 39.59 | 39.49 |
| TraesCS5A01G002900.1 | Wheat | cytosol | 39.33 | 36.26 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 3.34 | 0.69 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:50.2.3 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016747 | InterPro:IPR016039 |
| PFAM:PF00195 | PFAM:PF02797 | PIRSF:PIRSF000451 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF34 | InterPro:Polyketide_synthase_type-III |
| SUPFAM:SSF53901 | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS5A01G379500 | EnsemblPlants:TraesCS5A01G379500.1 | TIGR:cd00831 | SEG:seg |
Description
No Description!
Coordinates
chr5A:-:577078308..577079611
Molecular Weight (calculated)
42086.6 Da
IEP (calculated)
6.514
GRAVY (calculated)
-0.031
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVQQIRHA QRSDGPAAVL AIGTANPASC MLQNDYADYY FRVTNSEHHA DLKDKLKRIC KNSGIERRYV HLDEELLGAH PDFSDRALPT LDARIDMASA
101: AVPELAASAA ARAIAEWGRP AADVTHLVFS TYSGGKAPSA DLRLASLLGL RPTVSRTILS LNGCSGGGRA LQLAKELAEN NRGARVLVAC SELTLIGFYG
201: PQEGRLDTIL GNGIFGDGAG AVIVGADPVD CIERPLFEMA FATQTTIPET ENEITTRLMK GGLDFHVSIR VPKLLKSNIE RCLIDTFKSI GISAEWNDLF
301: WAIHPGGRAI LDHVEQLLGL GVEKLAASRR VLREYGNMSA ATVIFVLDEL RRRRARGEEV AEWGVMMAFG PGITIETMVL HAAGSLKEN
101: AVPELAASAA ARAIAEWGRP AADVTHLVFS TYSGGKAPSA DLRLASLLGL RPTVSRTILS LNGCSGGGRA LQLAKELAEN NRGARVLVAC SELTLIGFYG
201: PQEGRLDTIL GNGIFGDGAG AVIVGADPVD CIERPLFEMA FATQTTIPET ENEITTRLMK GGLDFHVSIR VPKLLKSNIE RCLIDTFKSI GISAEWNDLF
301: WAIHPGGRAI LDHVEQLLGL GVEKLAASRR VLREYGNMSA ATVIFVLDEL RRRRARGEEV AEWGVMMAFG PGITIETMVL HAAGSLKEN
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.