Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G022700.1 | Wheat | cytosol, mitochondrion, plastid | 96.5 | 96.5 |
| HORVU2Hr1G003280.1 | Barley | cytosol | 87.0 | 87.66 |
| TraesCSU01G000100.1 | Wheat | cytosol, mitochondrion | 82.5 | 81.89 |
| TraesCSU01G143400.1 | Wheat | cytosol, mitochondrion | 82.0 | 81.39 |
| Os07t0526400-01 | Rice | cytosol | 68.5 | 68.67 |
| Os07t0525900-00 | Rice | cytosol | 68.25 | 68.59 |
| TraesCS4A01G436200.1 | Wheat | cytosol, plastid | 64.75 | 65.57 |
| TraesCS4A01G436400.1 | Wheat | cytosol, plastid | 64.5 | 65.32 |
| TraesCS4A01G438100.1 | Wheat | cytosol | 64.25 | 65.06 |
| TraesCS4A01G438200.1 | Wheat | cytosol | 64.0 | 64.81 |
| TraesCS7A01G093900.1 | Wheat | mitochondrion | 62.75 | 63.71 |
| TraesCS4A01G437600.1 | Wheat | cytosol | 62.25 | 62.56 |
| Os07t0525500-00 | Rice | plastid | 60.25 | 61.64 |
| TraesCS4A01G392800.1 | Wheat | cytosol, mitochondrion | 52.75 | 61.52 |
| TraesCS5A01G379400.1 | Wheat | mitochondrion | 58.5 | 61.1 |
| TraesCS2A01G014800.1 | Wheat | cytosol | 59.75 | 60.66 |
| TraesCS4A01G437900.1 | Wheat | unclear | 65.75 | 60.18 |
| TraesCS5A01G379500.1 | Wheat | cytosol, mitochondrion | 58.25 | 59.9 |
| TraesCS6A01G215600.1 | Wheat | mitochondrion | 59.0 | 59.3 |
| TraesCS6A01G298400.1 | Wheat | cytosol | 59.25 | 59.1 |
| TraesCS5A01G379600.1 | Wheat | cytosol | 50.5 | 58.55 |
| TraesCS4A01G292500.1 | Wheat | cytosol | 55.75 | 56.03 |
| TraesCS5A01G526900.1 | Wheat | cytosol, mitochondrion | 51.75 | 51.88 |
| TraesCS6A01G015300.1 | Wheat | cytosol | 52.25 | 51.86 |
| TraesCS6A01G015500.1 | Wheat | cytosol, plastid | 52.5 | 51.47 |
| TraesCS2A01G035300.1 | Wheat | cytosol | 49.5 | 50.25 |
| TraesCS2A01G025500.1 | Wheat | cytosol | 49.25 | 50.0 |
| TraesCS2A01G025600.1 | Wheat | cytosol | 49.0 | 49.75 |
| TraesCS2A01G025700.1 | Wheat | cytosol, golgi | 48.75 | 49.49 |
| TraesCS2A01G527700.2 | Wheat | cytosol | 48.75 | 48.99 |
| TraesCS1A01G032100.1 | Wheat | cytosol | 48.0 | 48.61 |
| TraesCS1A01G032300.1 | Wheat | cytosol | 48.0 | 48.24 |
| TraesCS1A01G160300.1 | Wheat | cytosol | 37.25 | 38.21 |
| TraesCS5A01G002900.1 | Wheat | cytosol | 37.25 | 35.31 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 3.75 | 0.79 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:50.2.3 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016747 | InterPro:IPR016039 |
| PFAM:PF00195 | PFAM:PF02797 | PIRSF:PIRSF000451 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF24 | InterPro:Polyketide_synthase_type-III |
| SUPFAM:SSF53901 | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS2A01G021700 | EnsemblPlants:TraesCS2A01G021700.1 | TIGR:cd00831 | SEG:seg |
Description
No Description!
Coordinates
chr2A:+:10465069..10466373
Molecular Weight (calculated)
43113.7 Da
IEP (calculated)
5.143
GRAVY (calculated)
-0.005
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSNTLTLMH EIRRSHRAEG PAAILAVGTA NPPNCVSEEE YPDYYFRVTK SQHLTDLKQK LKTFCQMTST EKRYFHHTEE LLDAHPEFLC RDKPSLDARL
101: DIAAAAAPEL AASAAAKAIA EWGRPATDIT HLVVSTNSGA HAPGADLRLA SLLGLRASVC RTMLNLNGCS AGAASLRLAK DLAENNRGAR VLVACVELTV
201: VAFRGPEEAY PHRLISQAIF GDGAGAVIVG ADAVLSVERP LFEMVSASQT TIPATDGVLT MQLTEAGLDG DIFTRELTPL AAQHIGQCLT DAFQPLGIMS
301: GGAEWNDLFF VVHPGLRGIM DHIDGALRLD PGKLAASRTV LREYGNMLGA TLIFVLDEQR RRMEEDGETG EWGVMMGFGP GFTVETMVLH AVVIDLHDEN
101: DIAAAAAPEL AASAAAKAIA EWGRPATDIT HLVVSTNSGA HAPGADLRLA SLLGLRASVC RTMLNLNGCS AGAASLRLAK DLAENNRGAR VLVACVELTV
201: VAFRGPEEAY PHRLISQAIF GDGAGAVIVG ADAVLSVERP LFEMVSASQT TIPATDGVLT MQLTEAGLDG DIFTRELTPL AAQHIGQCLT DAFQPLGIMS
301: GGAEWNDLFF VVHPGLRGIM DHIDGALRLD PGKLAASRTV LREYGNMLGA TLIFVLDEQR RRMEEDGETG EWGVMMGFGP GFTVETMVLH AVVIDLHDEN
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.