Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- vacuole 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0526400-01 | Rice | cytosol | 68.03 | 66.67 |
| Os07t0525900-00 | Rice | cytosol | 67.01 | 65.83 |
| TraesCS2D01G022700.1 | Wheat | cytosol, mitochondrion, plastid | 61.64 | 60.25 |
| TraesCS2A01G021700.1 | Wheat | cytosol | 61.64 | 60.25 |
| TraesCS2B01G072600.1 | Wheat | mitochondrion | 60.87 | 59.35 |
| TraesCS2B01G007000.1 | Wheat | cytosol | 60.36 | 59.0 |
| HORVU2Hr1G003280.1 | Barley | cytosol | 59.85 | 58.94 |
| TraesCS2D01G051300.1 | Wheat | cytosol | 59.34 | 57.86 |
| TraesCS3D01G500500.1 | Wheat | cytosol | 59.34 | 57.86 |
| TraesCSU01G000100.1 | Wheat | cytosol, mitochondrion | 59.08 | 57.32 |
| TraesCSU01G143400.1 | Wheat | cytosol, mitochondrion | 58.82 | 57.07 |
| Os11t0529125-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 11.0 | 56.58 |
| Os10t0177300-00 | Rice | cytosol, mitochondrion, peroxisome | 43.73 | 53.94 |
| Os07t0271500-01 | Rice | cytosol | 53.2 | 51.74 |
| Os10t0168500-00 | Rice | cytosol, peroxisome, plastid | 35.04 | 51.7 |
| Os11t0529800-00 | Rice | cytosol, extracellular | 49.62 | 48.38 |
| Os10t0167900-00 | Rice | cytosol | 49.1 | 48.12 |
| Os10t0158400-00 | Rice | cytosol | 48.59 | 47.74 |
| Os11t0529500-00 | Rice | cytosol | 50.38 | 47.7 |
| TraesCS7B01G371700.1 | Wheat | plastid | 52.94 | 47.15 |
| Os05t0212900-00 | Rice | cytosol | 47.06 | 46.94 |
| Os07t0501100-01 | Rice | cytosol | 46.8 | 45.19 |
| Os05t0213100-00 | Rice | cytosol, peroxisome, plastid | 48.85 | 44.73 |
| Os10t0162856-00 | Rice | cytosol | 49.36 | 44.57 |
| Os05t0212600-00 | Rice | cytosol | 31.71 | 41.06 |
| Os11t0530600-01 | Rice | cytosol, mitochondrion, plasma membrane | 41.69 | 40.95 |
| Os07t0214900-00 | Rice | cytosol | 41.18 | 39.95 |
| Os01t0602600-00 | Rice | cytosol | 32.74 | 38.32 |
| Os04t0103900-01 | Rice | cytosol | 36.06 | 35.88 |
| Os10t0484800-01 | Rice | cytosol | 34.78 | 34.96 |
| Os07t0411300-00 | Rice | cytosol | 34.78 | 33.58 |
| Os11t0566800-01 | Rice | cytosol | 32.23 | 31.58 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 3.07 | 0.64 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:50.2.3 | ProteinID:BAD30750.1 | ProteinID:BAT01846.1 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 |
| GO:GO:0016746 | GO:GO:0016747 | InterPro:IPR016039 | EnsemblPlantsGene:Os07g0525500 | EnsemblPlants:Os07t0525500-00 | PFAM:PF00195 |
| PFAM:PF02797 | PIRSF:PIRSF000451 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF24 | InterPro:Polyketide_synthase_type-III | UniProt:Q69UB7 |
| SUPFAM:SSF53901 | InterPro:Thiolase-like | UniParc:UPI00003FE7E0 | SEG:seg | : | : |
Description
POLYKETIDE SYNTHASE 13Similar to chalcone synthase 8. (Os07t0525500-00)
Coordinates
chr7:-:20420138..20421500
Molecular Weight (calculated)
41687.8 Da
IEP (calculated)
6.237
GRAVY (calculated)
-0.094
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPSTTSVVR SVQTPPPPCW PSAPRTRSPA SPKPTTPTTT SVSPTQSTSL TSNANSTTYA SGADKRFFHH NEEMIAAHPE FLDRATPSLD ARLDIAAAAG
101: PELAAQAAER AIVRWGRPAA DITHLVVATN AGAQAPGADH RLASLLGLRP TVRRTMLHLS GCSAGAAALR LAKDLAENSR GARVLVACVE LNVVAFHGLK
201: EDYPQTLTCQ GLFGDGAGAV IVGADAVRPV ERPLFEMVAV SQAVIPGTEH ALNMRLTEHG LDGHVSIKDL IPLAAANADE LLSDAFRQLG LAGVEWNDLF
301: WVVHPGAPSI LDQIESALRL EPGKLAASRK VLREYGNMLG STLIFVLDEQ RRRMEEEEGG RSAEWGVMMG FGPGFTIETM VLHLPECPKE Q
101: PELAAQAAER AIVRWGRPAA DITHLVVATN AGAQAPGADH RLASLLGLRP TVRRTMLHLS GCSAGAAALR LAKDLAENSR GARVLVACVE LNVVAFHGLK
201: EDYPQTLTCQ GLFGDGAGAV IVGADAVRPV ERPLFEMVAV SQAVIPGTEH ALNMRLTEHG LDGHVSIKDL IPLAAANADE LLSDAFRQLG LAGVEWNDLF
301: WVVHPGAPSI LDQIESALRL EPGKLAASRK VLREYGNMLG STLIFVLDEQ RRRMEEEEGG RSAEWGVMMG FGPGFTIETM VLHLPECPKE Q
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.