Factsheet for TraesCSU01G000100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G143400.1	Wheat	cytosol, mitochondrion	94.54	94.54
TraesCS2B01G072600.1	Wheat	mitochondrion	82.38	82.79
TraesCS2A01G021700.1	Wheat	cytosol	81.89	82.5
TraesCS2D01G022700.1	Wheat	cytosol, mitochondrion, plastid	81.64	82.25
TraesCS3D01G500500.1	Wheat	cytosol	81.64	82.04
TraesCS2D01G051300.1	Wheat	cytosol	81.39	81.8
TraesCS2B01G007000.1	Wheat	cytosol	79.9	80.5
HORVU2Hr1G003280.1	Barley	cytosol	78.91	80.1
Os07t0526400-01	Rice	cytosol	67.99	68.67
Os07t0525900-00	Rice	cytosol	66.25	67.09
Os07t0525500-00	Rice	plastid	57.32	59.08
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.47	0.74

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF24	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCSU01G000100	EnsemblPlants:TraesCSU01G000100.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chrUn:-:1335..2697

Molecular Weight (calculated)

43783.7 Da

IEP (calculated)

6.405

GRAVY (calculated)

-0.010

Length

403 amino acids

Sequence
(BLAST)

001: MATLLSTVRE IRRSQRAEGA AAVLAIGTAN PANCVSQEEY PDYYFRVTKS QHLTDLKQKF KAMCQMTPTD KRYFHHTEEL LDAHPDFLCR GKPSLDARLA
101: ITAVAAPELA ASAAAKAIAE WGRPATDITH LVVSTNSGAH SPGADLRLAS LLGLRVSVRR TMLYLNGCSA GAASLRLAKD LAENNRGARV LVVCIELTIV
201: SFRGPEEADA HPHTLISQAF FGDGAGAVIV GADAVHTIEH PIFEMVSASQ TMIPGTDRVL TMQLTEAGLD GHIFTKELVP IAAQHIDQCL TDAFQPLGVM
301: SDGATLWNDL FFVVHPGIRG ILDHIEGALQ LETGKLVASR TMLREYGNML GATVIFVLDE QRRRMEEDRG MRGEWGVMMG FGPGFTIETM VLHAVDSNTH
401: NKN

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.