Factsheet for TraesCS2D01G022700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

mitochondrion 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G021700.1	Wheat	cytosol	96.5	96.5
TraesCS2D01G051300.1	Wheat	cytosol	88.5	88.28
TraesCS3D01G500500.1	Wheat	cytosol	88.25	88.03
HORVU2Hr1G003280.1	Barley	cytosol	87.25	87.91
TraesCSU01G000100.1	Wheat	cytosol, mitochondrion	82.25	81.64
TraesCSU01G143400.1	Wheat	cytosol, mitochondrion	82.0	81.39
Os07t0526400-01	Rice	cytosol	69.25	69.42
Os07t0525900-00	Rice	cytosol	68.0	68.34
TraesCS2D01G016200.1	Wheat	cytosol	68.0	68.17
TraesCS7D01G046500.1	Wheat	unclear	65.75	66.58
TraesCS7D01G089300.1	Wheat	mitochondrion	64.75	65.24
TraesCS7D01G046700.1	Wheat	cytosol, mitochondrion	63.75	64.56
TraesCS2D01G016100.1	Wheat	cytosol	62.5	63.45
TraesCS7D01G047000.1	Wheat	cytosol, plastid	62.25	62.56
TraesCS6D01G197900.1	Wheat	cytosol	45.25	62.41
Os07t0525500-00	Rice	plastid	60.25	61.64
TraesCS1D01G359600.1	Wheat	cytosol	59.5	60.41
TraesCS6D01G278200.1	Wheat	cytosol	60.25	60.1
TraesCS2D01G030600.1	Wheat	mitochondrion	54.5	56.48
TraesCS4D01G351300.1	Wheat	mitochondrion	52.5	52.76
TraesCS2D01G027800.1	Wheat	cytosol	27.25	51.66
TraesCS2D01G027900.2	Wheat	cytosol	50.25	51.02
TraesCS2D01G034500.1	Wheat	cytosol	49.75	50.38
TraesCS2D01G027700.1	Wheat	cytosol	49.5	50.25
TraesCS5D01G488600.1	Wheat	cytosol	49.0	49.62
TraesCS5D01G488700.1	Wheat	cytosol	49.0	49.62
TraesCS6D01G018500.1	Wheat	plastid	53.5	48.86
TraesCS1D01G033600.1	Wheat	cytosol	48.0	48.12
TraesCS1D01G033800.1	Wheat	cytosol	47.75	47.99
TraesCS2D01G530600.1	Wheat	cytosol, plastid	49.25	41.21
TraesCS1D01G157500.1	Wheat	cytosol	37.5	38.46
TraesCS5D01G003600.1	Wheat	cytosol	37.5	35.63
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.75	0.79

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF24	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS2D01G022700	EnsemblPlants:TraesCS2D01G022700.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr2D:+:10310216..10311518

Molecular Weight (calculated)

43258.8 Da

IEP (calculated)

5.151

GRAVY (calculated)

-0.038

Length

400 amino acids

Sequence
(BLAST)

001: MGSNTLTSMH EIRRLQRAEG PAAILAVGTA NPPNCVSQEE YPDYYFRVTK SEHLTDLKQK LKSFCQMTST EKRYFHHTEE LLDAHPEFLR RDTPSLDARL
101: DIAAAAAPEL AASAAAKAIA EWGRPATDIT HLVVSTNSGA HAPGVDLRLA SLLGLRASVC RTMLNLNGCS AGAASLRLAK DLAENNRGAR VLVACVELTV
201: VAFRGPEEAY PHRLISQAIF GDGAGAVIVG ADAVRSVERP LFEMVSASQT TIPATDGVLT MQLTEAGLDG DIFTRELTPL AAQHIEQCLT DAFQPLGIMS
301: GGAEWNDLFF VVHPGLRGIM DHIDGALRLD PGKLVASRTV LREYGNMLGA TLIFVLDEQR RRMEEDGETG EWGVMMGFGP GFTVETMVLH AVAIDLHNEN

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.