Factsheet for TraesCS7D01G047000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G437600.1	Wheat	cytosol	91.46	91.46
TraesCS7D01G046500.1	Wheat	unclear	79.15	79.75
TraesCS7D01G046700.1	Wheat	cytosol, mitochondrion	76.88	77.47
TraesCS2D01G016200.1	Wheat	cytosol	64.32	64.16
TraesCS2D01G022700.1	Wheat	cytosol, mitochondrion, plastid	62.56	62.25
TraesCS2D01G051300.1	Wheat	cytosol	61.56	61.1
TraesCS3D01G500500.1	Wheat	cytosol	61.56	61.1
TraesCS6D01G197900.1	Wheat	cytosol	44.47	61.03
EER95816	Sorghum	cytosol	64.57	59.77
TraesCS2D01G016100.1	Wheat	cytosol	59.05	59.64
TraesCS6D01G278200.1	Wheat	cytosol	59.55	59.1
TraesCS7D01G089300.1	Wheat	mitochondrion	58.79	58.94
TraesCS1D01G359600.1	Wheat	cytosol	54.27	54.82
TraesCS2D01G030600.1	Wheat	mitochondrion	50.5	52.07
TraesCS4D01G351300.1	Wheat	mitochondrion	49.5	49.5
TraesCS2D01G027900.2	Wheat	cytosol	46.48	46.95
TraesCS2D01G034500.1	Wheat	cytosol	46.48	46.84
TraesCS2D01G027700.1	Wheat	cytosol	46.23	46.7
TraesCS2D01G027800.1	Wheat	cytosol	24.62	46.45
TraesCS6D01G018500.1	Wheat	plastid	49.25	44.75
TraesCS1D01G033600.1	Wheat	cytosol	44.72	44.61
TraesCS5D01G488600.1	Wheat	cytosol	44.22	44.56
TraesCS5D01G488700.1	Wheat	cytosol	44.22	44.56
TraesCS1D01G033800.1	Wheat	cytosol	44.22	44.22
TraesCS2D01G530600.1	Wheat	cytosol, plastid	45.98	38.28
TraesCS1D01G157500.1	Wheat	cytosol	36.18	36.92
TraesCS5D01G003600.1	Wheat	cytosol	33.67	31.83
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.52	0.74

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF34	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS7D01G047000	EnsemblPlants:TraesCS7D01G047000.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr7D:+:24326379..24327777

Molecular Weight (calculated)

42229.8 Da

IEP (calculated)

6.234

GRAVY (calculated)

0.155

Length

398 amino acids

Sequence
(BLAST)

001: MASSSIIPAT TMGKIRAAQP TDGLAAVLAI GTANPLHYVP QGDYPDYYFR VTHSDHLTHL KPTFAKLCRI TGVERRFFHH TEELLAAQPD MSLEARLEIV
101: AAAAPELAAS AAAKAIAEWG RPAADITHLV VTTNAGAHAP GTDVRLVSLL GLRHNVCRTA LQLNGCASGS AALRLAKDFA ENNRGARVLV VCVELTVAVF
201: RGPNETDSFD TLISQALFGD GAGAVIVGAD PHARERPLFN MVAASQAVIP DSEHVPKMQL GSGGIDWNVS NGLPRLAAGI IERCLLDALV DQLTAIVGSV
301: VDWNDLFWAV HPGSGGMLER IGKALRLAPE KLAASRTVVR EYGNMLGATV IFVLDEVRRR RIDPEGAGAG ADLNEEWGVM IGFGPGFTVE TMLLQAAT

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.