Factsheet for TraesCS2D01G016100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G006800.1	Wheat	cytosol	91.62	97.04
TraesCS2B01G006700.1	Wheat	cytosol	96.95	96.95
HORVU2Hr1G002640.1	Barley	cytosol	93.91	93.91
TraesCS2B01G006300.1	Wheat	extracellular, golgi	96.95	82.68
TraesCS2A01G014800.1	Wheat	cytosol	77.92	77.92
TraesCS7D01G089300.1	Wheat	mitochondrion	68.27	67.76
TraesCS2D01G016200.1	Wheat	cytosol	67.01	66.17
TraesCS7D01G046500.1	Wheat	unclear	62.69	62.53
TraesCS2D01G022700.1	Wheat	cytosol, mitochondrion, plastid	63.45	62.5
TraesCS3D01G500500.1	Wheat	cytosol	62.94	61.85
TraesCS2D01G051300.1	Wheat	cytosol	62.69	61.6
TraesCS7D01G046700.1	Wheat	cytosol, mitochondrion	61.68	61.52
TraesCS7D01G047000.1	Wheat	cytosol, plastid	59.64	59.05
TraesCS1D01G359600.1	Wheat	cytosol	56.35	56.35
TraesCS6D01G278200.1	Wheat	cytosol	56.85	55.86
TraesCS6D01G197900.1	Wheat	cytosol	40.36	54.83
TraesCS2D01G030600.1	Wheat	mitochondrion	51.27	52.33
TraesCS4D01G351300.1	Wheat	mitochondrion	50.76	50.25
TraesCS2D01G027800.1	Wheat	cytosol	26.14	48.82
TraesCS2D01G027900.2	Wheat	cytosol	46.7	46.7
TraesCS6D01G018500.1	Wheat	plastid	51.78	46.58
TraesCS2D01G027700.1	Wheat	cytosol	46.19	46.19
TraesCS2D01G034500.1	Wheat	cytosol	46.19	46.08
TraesCS1D01G033600.1	Wheat	cytosol	44.67	44.11
TraesCS1D01G033800.1	Wheat	cytosol	44.42	43.97
TraesCS5D01G488700.1	Wheat	cytosol	43.65	43.54
TraesCS5D01G488600.1	Wheat	cytosol	43.65	43.54
TraesCS2D01G530600.1	Wheat	cytosol, plastid	45.94	37.87
TraesCS1D01G157500.1	Wheat	cytosol	35.28	35.64
TraesCS5D01G003600.1	Wheat	cytosol	36.04	33.73
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.55	0.74

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF24	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS2D01G016100	EnsemblPlants:TraesCS2D01G016100.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr2D:+:7834403..7835682

Molecular Weight (calculated)

42516.9 Da

IEP (calculated)

5.731

GRAVY (calculated)

-0.043

Length

394 amino acids

Sequence
(BLAST)

001: MAGSSPKVSE IRCAQRAEGS AAMLAIGTAN PANKVSQEEY PDYYFRVTKS EHLTDHKDTF KIICGLTGTE NRFFYHTDEL LNSHPVLLDH TSPSREARHD
101: IVAKAAPELA AAAAKKAIAN WGRPASDITH LIVSTNSDAG APSADVRLVS LLGLRADVCR TMLHLNGCFA GCSALRLAKD LAENNRGARV LVACVELAIS
201: GFCSPGEGDC LDTLITHALF GDGAGAIIVG ADPMHPVENP LFEMVSVSQT LVPKTEQVLT LNLGSNGTHG KVYTKLPTLV ADNMEPCLLE AFGPLEMDFQ
301: WNDLFWAVHP GSRGILDQLD KTLQLEPTKL AASRTVVQKF GNMFSATVIF VLDELRRRME EEGEQAEWGA MVGFGPGFTI ETMVLHATGA LKKN

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.