Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G379400.1 | Wheat | mitochondrion | 74.62 | 76.76 |
| TraesCS5A01G379500.1 | Wheat | cytosol, mitochondrion | 75.63 | 76.61 |
| TraesCS5B01G383300.1 | Wheat | cytosol, mitochondrion | 74.37 | 75.32 |
| TraesCS5A01G379600.1 | Wheat | cytosol | 65.74 | 75.07 |
| OQU85107 | Sorghum | cytosol | 73.6 | 72.68 |
| OQU85124 | Sorghum | cytosol | 73.35 | 72.43 |
| KXG36274 | Sorghum | cytosol | 72.33 | 71.79 |
| EER99418 | Sorghum | cytosol | 72.84 | 71.75 |
| EES08732 | Sorghum | cytosol | 71.07 | 69.31 |
| EES09995 | Sorghum | cytosol | 71.07 | 69.31 |
| EES15677 | Sorghum | cytosol | 70.81 | 68.89 |
| HORVU5Hr1G093950.1 | Barley | cytosol | 67.77 | 66.25 |
| Os07t0501100-01 | Rice | cytosol | 65.99 | 64.2 |
| TraesCS2D01G030600.1 | Wheat | mitochondrion | 59.39 | 60.62 |
| TraesCS2D01G022700.1 | Wheat | cytosol, mitochondrion, plastid | 60.41 | 59.5 |
| TraesCS6D01G197900.1 | Wheat | cytosol | 43.4 | 58.97 |
| TraesCS4D01G351300.1 | Wheat | mitochondrion | 58.88 | 58.29 |
| TraesCS3D01G500500.1 | Wheat | cytosol | 58.63 | 57.61 |
| TraesCS2D01G051300.1 | Wheat | cytosol | 58.38 | 57.36 |
| TraesCS6D01G278200.1 | Wheat | cytosol | 58.38 | 57.36 |
| TraesCS2D01G016100.1 | Wheat | cytosol | 56.35 | 56.35 |
| TraesCS7D01G046500.1 | Wheat | unclear | 56.35 | 56.2 |
| TraesCS2D01G016200.1 | Wheat | cytosol | 56.6 | 55.89 |
| TraesCS7D01G046700.1 | Wheat | cytosol, mitochondrion | 55.33 | 55.19 |
| TraesCS7D01G047000.1 | Wheat | cytosol, plastid | 54.82 | 54.27 |
| TraesCS7D01G089300.1 | Wheat | mitochondrion | 54.57 | 54.16 |
| TraesCS6D01G018500.1 | Wheat | plastid | 57.36 | 51.6 |
| TraesCS2D01G027900.2 | Wheat | cytosol | 51.02 | 51.02 |
| TraesCS2D01G027800.1 | Wheat | cytosol | 27.16 | 50.71 |
| TraesCS2D01G034500.1 | Wheat | cytosol | 50.76 | 50.63 |
| TraesCS5D01G488700.1 | Wheat | cytosol | 50.51 | 50.38 |
| TraesCS5D01G488600.1 | Wheat | cytosol | 50.51 | 50.38 |
| TraesCS2D01G027700.1 | Wheat | cytosol | 50.25 | 50.25 |
| TraesCS1D01G033600.1 | Wheat | cytosol | 50.25 | 49.62 |
| TraesCS1D01G033800.1 | Wheat | cytosol | 49.75 | 49.25 |
| TraesCS2D01G530600.1 | Wheat | cytosol, plastid | 50.0 | 41.21 |
| TraesCS1D01G157500.1 | Wheat | cytosol | 37.82 | 38.21 |
| TraesCS5D01G003600.1 | Wheat | cytosol | 39.34 | 36.82 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 3.55 | 0.74 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:50.2.3 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016747 | InterPro:IPR016039 |
| PFAM:PF00195 | PFAM:PF02797 | PIRSF:PIRSF000451 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF34 | InterPro:Polyketide_synthase_type-III |
| SUPFAM:SSF53901 | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS1D01G359600 | EnsemblPlants:TraesCS1D01G359600.1 | TIGR:cd00831 | SEG:seg |
Description
No Description!
Coordinates
chr1D:-:442909553..442910812
Molecular Weight (calculated)
42713.3 Da
IEP (calculated)
5.446
GRAVY (calculated)
-0.025
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MATALQEIRQ AQRADGHAAV LAIGTANPAT SMLQDEYTDY YFRVTKSEHL THLKHKLKRI LRTPGIEKRF MHVSEEILDA HPDLIDRTLP TLDARIDMAS
101: AAVPKLAASA AWKAIVEWGR PATDITHLVF STYSGGRAPS ADLRLASLLG LRPTVCRTVL NLNGCSGGGR ALQIAKELAE NNRGARVLVA CSELTLIAFY
201: GPQDGCLDTI VGQGLFGDGA GAIVVGADPV EDERPLFEMA FTTQTTIPET EDAITMQLRK GGLDFHISSQ VPRLLAENIE RVLIDAFEPL GVVANGAAWN
301: DLFWAIHPGG RSILDNIEEL LGLDAEKLGA SRQVLRDFGN MSGATVIFVL DELRRRRAKE GETAAEWGVV MAFGPGITIE TMVLHAATNN LKEN
101: AAVPKLAASA AWKAIVEWGR PATDITHLVF STYSGGRAPS ADLRLASLLG LRPTVCRTVL NLNGCSGGGR ALQIAKELAE NNRGARVLVA CSELTLIAFY
201: GPQDGCLDTI VGQGLFGDGA GAIVVGADPV EDERPLFEMA FTTQTTIPET EDAITMQLRK GGLDFHISSQ VPRLLAENIE RVLIDAFEPL GVVANGAAWN
301: DLFWAIHPGG RSILDNIEEL LGLDAEKLGA SRQVLRDFGN MSGATVIFVL DELRRRRAKE GETAAEWGVV MAFGPGITIE TMVLHAATNN LKEN
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.