Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G379500.1 | Wheat | cytosol, mitochondrion | 94.26 | 92.8 |
| TraesCS5A01G379600.1 | Wheat | cytosol | 81.98 | 91.01 |
| TraesCS5B01G383300.1 | Wheat | cytosol, mitochondrion | 90.34 | 88.95 |
| HORVU5Hr1G093950.1 | Barley | cytosol | 80.16 | 76.18 |
| TraesCS1D01G359600.1 | Wheat | cytosol | 76.76 | 74.62 |
| OQU85124 | Sorghum | cytosol | 74.93 | 71.93 |
| OQU85107 | Sorghum | cytosol | 74.67 | 71.68 |
| KXG36274 | Sorghum | cytosol | 72.58 | 70.03 |
| EER99418 | Sorghum | cytosol | 72.85 | 69.75 |
| EES08732 | Sorghum | cytosol | 73.11 | 69.31 |
| EES09995 | Sorghum | cytosol | 73.11 | 69.31 |
| EES15677 | Sorghum | cytosol | 69.97 | 66.17 |
| Os07t0501100-01 | Rice | cytosol | 65.8 | 62.22 |
| TraesCS5A01G526900.1 | Wheat | cytosol, mitochondrion | 61.88 | 59.4 |
| TraesCS6A01G015300.1 | Wheat | cytosol | 61.62 | 58.56 |
| TraesCS2A01G021700.1 | Wheat | cytosol | 61.1 | 58.5 |
| TraesCS6A01G215600.1 | Wheat | mitochondrion | 60.05 | 57.79 |
| TraesCS6A01G298400.1 | Wheat | cytosol | 59.27 | 56.61 |
| TraesCS4A01G436200.1 | Wheat | cytosol, plastid | 57.96 | 56.2 |
| TraesCS6A01G015500.1 | Wheat | cytosol, plastid | 59.79 | 56.13 |
| TraesCS4A01G436400.1 | Wheat | cytosol, plastid | 57.44 | 55.7 |
| TraesCS4A01G438200.1 | Wheat | cytosol | 57.18 | 55.44 |
| TraesCS4A01G438100.1 | Wheat | cytosol | 57.18 | 55.44 |
| TraesCS7A01G093900.1 | Wheat | mitochondrion | 56.66 | 55.08 |
| TraesCS4A01G292500.1 | Wheat | cytosol | 56.4 | 54.27 |
| TraesCS4A01G437600.1 | Wheat | cytosol | 55.87 | 53.77 |
| TraesCS4A01G392800.1 | Wheat | cytosol, mitochondrion | 48.04 | 53.64 |
| TraesCS2A01G014800.1 | Wheat | cytosol | 53.52 | 52.03 |
| TraesCS4A01G437900.1 | Wheat | unclear | 57.7 | 50.57 |
| TraesCS2A01G025700.1 | Wheat | cytosol, golgi | 51.7 | 50.25 |
| TraesCS2A01G035300.1 | Wheat | cytosol | 51.44 | 50.0 |
| TraesCS2A01G025600.1 | Wheat | cytosol | 51.44 | 50.0 |
| TraesCS2A01G527700.2 | Wheat | cytosol | 51.17 | 49.25 |
| TraesCS2A01G025500.1 | Wheat | cytosol | 50.65 | 49.24 |
| TraesCS1A01G032100.1 | Wheat | cytosol | 49.61 | 48.1 |
| TraesCS1A01G032300.1 | Wheat | cytosol | 49.35 | 47.49 |
| TraesCS1A01G160300.1 | Wheat | cytosol | 39.43 | 38.72 |
| TraesCS5A01G002900.1 | Wheat | cytosol | 38.38 | 34.83 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 3.39 | 0.69 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:50.2.3 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016747 | InterPro:IPR016039 |
| PFAM:PF00195 | PFAM:PF02797 | PIRSF:PIRSF000451 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF34 | InterPro:Polyketide_synthase_type-III |
| SUPFAM:SSF53901 | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS5A01G379400 | EnsemblPlants:TraesCS5A01G379400.1 | TIGR:cd00831 | SEG:seg |
Description
No Description!
Coordinates
chr5A:+:576596182..576611045
Molecular Weight (calculated)
41674.3 Da
IEP (calculated)
6.677
GRAVY (calculated)
-0.034
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVQQIRRV QRADGPAAVL AIGTANPASC TDYYFRVTNS EHHADLKDKL KRICKKSGIE RRYAHLDEEL LGAHPDFTDR ALRTLDARID MASAAVPELA
101: ASAAAKAIAE WGRPAADVTH LVFSTYSGRK APSADLRLAS LLGLRPTVSR TILSLNGCSG GGRALQLAKE LAENNRGARV LVACSELTLI AFYGPQEGRL
201: DTILGHGIFG DGAGAVIVGA DPVDCIERPL FEMVFATQTT IPETEDEITM RLMKGGLDFH VSIRVPKLLK SNIERCMIDA FESIGISAEW NDLFWAIHPG
301: GRAILDHVEQ LLGLGVEKLA ASRRVLREYG DMSDATVIFV LNELRRRRAR GEEVAEWGMM MAFGPGITIE TMVLHAAGSL KEN
101: ASAAAKAIAE WGRPAADVTH LVFSTYSGRK APSADLRLAS LLGLRPTVSR TILSLNGCSG GGRALQLAKE LAENNRGARV LVACSELTLI AFYGPQEGRL
201: DTILGHGIFG DGAGAVIVGA DPVDCIERPL FEMVFATQTT IPETEDEITM RLMKGGLDFH VSIRVPKLLK SNIERCMIDA FESIGISAEW NDLFWAIHPG
301: GRAILDHVEQ LLGLGVEKLA ASRRVLREYG DMSDATVIFV LNELRRRRAR GEEVAEWGMM MAFGPGITIE TMVLHAAGSL KEN
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.