Factsheet for TraesCS4A01G392800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G089300.1	Wheat	mitochondrion	96.79	83.63
TraesCS7A01G093900.1	Wheat	mitochondrion	82.51	71.83
HORVU7Hr1G020920.2	Barley	cytosol, peroxisome	80.17	59.27
TraesCS2A01G014800.1	Wheat	cytosol	61.52	53.55
TraesCS2A01G021700.1	Wheat	cytosol	61.52	52.75
TraesCS4A01G436400.1	Wheat	cytosol, plastid	58.6	50.89
TraesCS4A01G436200.1	Wheat	cytosol, plastid	58.6	50.89
TraesCS4A01G438100.1	Wheat	cytosol	58.31	50.63
TraesCS4A01G438200.1	Wheat	cytosol	58.02	50.38
TraesCS4A01G437600.1	Wheat	cytosol	57.43	49.5
TraesCS5A01G379400.1	Wheat	mitochondrion	53.64	48.04
TraesCS6A01G298400.1	Wheat	cytosol	55.69	47.63
TraesCS5A01G379500.1	Wheat	cytosol, mitochondrion	53.94	47.56
TraesCS6A01G215600.1	Wheat	mitochondrion	53.94	46.48
TraesCS4A01G437900.1	Wheat	unclear	58.02	45.54
TraesCS4A01G292500.1	Wheat	cytosol	52.48	45.23
TraesCS5A01G379600.1	Wheat	cytosol	44.31	44.06
TraesCS6A01G015300.1	Wheat	cytosol	49.85	42.43
TraesCS5A01G526900.1	Wheat	cytosol, mitochondrion	48.98	42.11
TraesCS6A01G015500.1	Wheat	cytosol, plastid	49.85	41.91
TraesCS2A01G025500.1	Wheat	cytosol	44.31	38.58
TraesCS2A01G025600.1	Wheat	cytosol	44.31	38.58
TraesCS2A01G035300.1	Wheat	cytosol	44.02	38.32
TraesCS2A01G025700.1	Wheat	cytosol, golgi	43.73	38.07
TraesCS2A01G527700.2	Wheat	cytosol	43.73	37.69
TraesCS1A01G032100.1	Wheat	cytosol	42.57	36.96
TraesCS1A01G032300.1	Wheat	cytosol	42.86	36.93
TraesCS1A01G160300.1	Wheat	cytosol	36.15	31.79
TraesCS5A01G002900.1	Wheat	cytosol	35.86	29.15
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.21	0.58

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF34	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS4A01G392800	EnsemblPlants:TraesCS4A01G392800.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr4A:-:668440694..668443734

Molecular Weight (calculated)

36954.8 Da

IEP (calculated)

6.997

GRAVY (calculated)

0.099

Length

343 amino acids

Sequence
(BLAST)

001: MANTTANARE IRRLQRADGP AAMLAIGTAN PPNCVSQDEY PEYYFRVSKS EHLAEKLTDT LKIICALTGN ERRFTYNTEK MLSAHPEFLD RALPSLEQRL
101: AIVAAAAPEL LAAAATKAIA IWGRPATDIT HLIVVTNSGA GAPSADVHLA TLLGLHHNVR RTVLHLNGCF AGCSALRLAK DLAENNRGAR VLVACVELMS
201: VAGFRGPDLS EDSVNNLIRN TVFGDGAGAV IVGADPVEPV ERPLFEMVSA SQTVVPNTLQ LLSMELKTYG LDGNVSTKLP KLVADSIKQC LLDSFGPLGI
301: EVKWNDLFWA VHPGAIAILD KIDRVLLLEP GKLMASARIW KHA

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.