Factsheet for TraesCS4A01G438200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G438100.1	Wheat	cytosol	99.49	99.49
TraesCS7D01G046500.1	Wheat	unclear	92.66	92.66
TraesCS4A01G436400.1	Wheat	cytosol, plastid	90.63	90.63
TraesCS4A01G436200.1	Wheat	cytosol, plastid	90.63	90.63
TraesCS7D01G046700.1	Wheat	cytosol, mitochondrion	90.38	90.38
HORVU7Hr1G009190.1	Barley	cytosol	85.82	87.82
TraesCS4A01G437900.1	Wheat	unclear	92.91	83.98
TraesCS4A01G437600.1	Wheat	cytosol	76.46	75.88
TraesCS2A01G021700.1	Wheat	cytosol	64.81	64.0
EER95816	Sorghum	cytosol	65.32	60.0
TraesCS7A01G093900.1	Wheat	mitochondrion	59.75	59.9
TraesCS2A01G014800.1	Wheat	cytosol	59.75	59.9
TraesCS6A01G298400.1	Wheat	cytosol	59.24	58.35
TraesCS4A01G392800.1	Wheat	cytosol, mitochondrion	50.38	58.02
TraesCS5A01G379400.1	Wheat	mitochondrion	55.44	57.18
TraesCS5A01G379500.1	Wheat	cytosol, mitochondrion	55.44	56.3
TraesCS6A01G215600.1	Wheat	mitochondrion	56.71	56.28
TraesCS4A01G292500.1	Wheat	cytosol	55.19	54.77
TraesCS5A01G379600.1	Wheat	cytosol	46.33	53.04
TraesCS5A01G526900.1	Wheat	cytosol, mitochondrion	52.91	52.38
TraesCS6A01G015300.1	Wheat	cytosol	51.65	50.62
TraesCS6A01G015500.1	Wheat	cytosol, plastid	51.39	49.75
TraesCS2A01G035300.1	Wheat	cytosol	46.58	46.7
TraesCS2A01G025600.1	Wheat	cytosol	46.58	46.7
TraesCS2A01G025500.1	Wheat	cytosol	46.33	46.45
TraesCS2A01G025700.1	Wheat	cytosol, golgi	46.08	46.19
TraesCS2A01G527700.2	Wheat	cytosol	45.82	45.48
TraesCS1A01G032100.1	Wheat	cytosol	44.81	44.81
TraesCS1A01G032300.1	Wheat	cytosol	44.81	44.47
TraesCS1A01G160300.1	Wheat	cytosol	35.19	35.64
TraesCS5A01G002900.1	Wheat	cytosol	35.95	33.65
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	4.05	0.85

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF34	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS4A01G438200	EnsemblPlants:TraesCS4A01G438200.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr4A:+:707702268..707703455

Molecular Weight (calculated)

41721.1 Da

IEP (calculated)

6.297

GRAVY (calculated)

0.138

Length

395 amino acids

Sequence
(BLAST)

001: MAGSSSIPAT TVREIRVVQR ADGAAAVLAI GTANPHHCVP QGDYHDYYFR VTNSDHLTDL KPTFAKLCGM TGIGRRFFHH TDEMLATHPN LSLDARLDVV
101: ATAAPELAAS AAAKAIAEWG RPVGDITHLV VSTNAGSHAP GTDVRLVSLL GLRHDVLRTV LQLNGCATGC AALRLAKDLA ENNRGARVLV ACVELTITAF
201: RGPDKADSFD ALIPQGLFGD GAGAVIVGAE PYVHERPLFE MVSASQYVIP DTEHMLTMQL GSGGIGGTIA TGLPRLAAGI VEQCLLDAFG DRLAGSGGVV
301: EWNNLFWAVH PGSSVMLDHI VRALRLAPGK LAASRTVVRE YGNMLGATVI FVLDEVRRQR EDPQGEGAGH DEGWGVMMGF GPGFTVEAML LHAAT

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.