Factsheet for TraesCS6A01G298400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G327900.1	Wheat	cytosol	82.04	98.5
TraesCS6D01G278200.1	Wheat	cytosol	98.25	98.25
HORVU6Hr1G074060.2	Barley	cytosol	94.76	94.29
EER99419	Sorghum	cytosol	79.05	78.47
Zm00001d021562_P001	Maize	cytosol, mitochondrion	78.3	78.11
Zm00001d000438_P001	Maize	cytosol, mitochondrion	78.3	78.11
Os07t0271500-01	Rice	cytosol	70.82	70.65
TraesCS4A01G437600.1	Wheat	cytosol	59.6	60.05
TraesCS6A01G215600.1	Wheat	mitochondrion	59.1	59.55
TraesCS4A01G438100.1	Wheat	cytosol	58.6	59.49
TraesCS4A01G436400.1	Wheat	cytosol, plastid	58.6	59.49
TraesCS4A01G436200.1	Wheat	cytosol, plastid	58.6	59.49
TraesCS5A01G379400.1	Wheat	mitochondrion	56.61	59.27
TraesCS2A01G021700.1	Wheat	cytosol	59.1	59.25
TraesCS4A01G438200.1	Wheat	cytosol	58.35	59.24
TraesCS5A01G379500.1	Wheat	cytosol, mitochondrion	56.11	57.84
TraesCS4A01G292500.1	Wheat	cytosol	56.86	57.29
TraesCS7A01G093900.1	Wheat	mitochondrion	55.86	56.85
TraesCS4A01G392800.1	Wheat	cytosol, mitochondrion	47.63	55.69
TraesCS5A01G379600.1	Wheat	cytosol	47.63	55.36
TraesCS4A01G437900.1	Wheat	unclear	59.1	54.23
TraesCS2A01G014800.1	Wheat	cytosol	53.12	54.06
TraesCS5A01G526900.1	Wheat	cytosol, mitochondrion	53.12	53.38
TraesCS6A01G015300.1	Wheat	cytosol	53.62	53.35
TraesCS6A01G015500.1	Wheat	cytosol, plastid	52.87	51.96
TraesCS2A01G035300.1	Wheat	cytosol	50.37	51.27
TraesCS2A01G025600.1	Wheat	cytosol	50.12	51.02
TraesCS2A01G025500.1	Wheat	cytosol	50.12	51.02
TraesCS2A01G025700.1	Wheat	cytosol, golgi	49.63	50.51
TraesCS2A01G527700.2	Wheat	cytosol	49.63	50.0
TraesCS1A01G032100.1	Wheat	cytosol	47.63	48.35
TraesCS1A01G032300.1	Wheat	cytosol	47.38	47.74
TraesCS1A01G160300.1	Wheat	cytosol	37.41	38.46
TraesCS5A01G002900.1	Wheat	cytosol	38.9	36.97
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.24	0.69

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009813
GO:GO:0016740	GO:GO:0016747	GO:GO:0042802	InterPro:IPR016039	PFAM:PF00195	PFAM:PF02797
PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF34	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like
EnsemblPlantsGene:TraesCS6A01G298400	EnsemblPlants:TraesCS6A01G298400.1	TIGR:cd00831	SEG:seg	:	:

Description

No Description!

Coordinates

chr6A:-:531697395..531698718

Molecular Weight (calculated)

43185.0 Da

IEP (calculated)

6.233

GRAVY (calculated)

0.053

Length

401 amino acids

Sequence
(BLAST)

001: MGSVPAATPS VREICRAQRA DGPAAVLAIG TANPAHCVPQ DEFPDFYFRA TNSDHLTALK GKFKRVFQKL GVERRYLHHT EELLRAHPEF LDDEAASLDA
101: RLDIVATAVP ELAAEASKKA IAEWGRPAAD ITHLVVTTNS GAHIPGVDFR LIALLGLRPS VRRTMLYLNG CFAGSAALRL AKDLAENNRG ARVLVVCAEL
201: TLMLFNGPKE GSFERLIHQG LFGDGAGAVV VGADPLSPVE HALFEMVSAA QTVIPDSGDA ITMHITKGGF GGNISTREVP VFIGDNVERC LHDSLEPLGV
301: GAKWNDLFWA VHPGSSAILD RIDTVLQLEP EKLAASRRVL SDYGNMFGVT IIFVLDELRR RLREQEGVGG APEWGVVMTF GPGLTVETMV LHATGHMHAS
401: P

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.